Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02967 ATGGTAAGACGATTGCTTTCAAGGATTGATCTTGGAAGAACGGGTGAGGAGAGATCTGGCTCACAGTACAAGAGAGTGAAGATCCATGGCGAAGTTCTTTTGGGATTTCTGTTCATCTGCATAGTCCAGTTTTCACATGCAGATACTGATCCCTCTGATGTTGCAGCAATAAATAACTTATATACTGCATTGGGCAACCCTGTTCTTCCCGGGTGGGTTCCTAGTGGAGGTGATCCGTGCGGACAAGGGTGGCAAGGTGTTCGATGTAATGGCTCAGTAATTCAAGAAATAACTCTGAATGGTGCAAACTTGGGAGGAGAACTGGGTGACAGCTTAGGAAGTTTTGTTTCTATCAGAGCAATAGTTCTAAACAACAATCACATTGGGGGAAGTATTCCATCCAGTTTGCCAGTCACTTTGCAACACTTCTTTCTTTCAGATAACCAGTTCATCGGAAGTATTCCAGCCTCTTTATCCTCGTTGGCTGGATTGACTGACATGTCTCTTAACGACAATCTTTTAACAGGAGAAATACCAGATGCATTTCAGTCTCTTACTCAATTGATCAATCTAGATTTGTCTAATAATAATTTGAGTGGGGAATTGCCTCCATCTATGGAGAATTTGTCAGCTCTGACCAGCGTACATTTACAGAACAATAACATCTCTGGTACCCTGGATGTTTTACAAGACCTTCCGCTGCGAGATTTGAATGTTGAGAACAACCAGTTTGTTGGACCAATACCCCCGAAGCTGTTAAGCATACCTAACTTCAGAAATGATGGAAACCCGTTTAATCTTAATGTCAATGCTACTATATCCCCGGCACGTCAACCTCATTCTCCAGTGCCAGTATCGCCACCAGGAACTGTGGTTTCTGGGACTCCATCATCTGGACGTTTACCTACCAAACCTACTGATGGACCAACTGCAGCAAAGGAATCAAATTCTGTGAAATCGAAAAAGAACACCAAGAGGGTGGTTTGGATATCTATTTCTAGTATATTGATGTTTGTTATTGTAGTACTGGGACTTCTTCTCTTTGTTCCAAGATGTAGTAGAAGAGAACAGGTTAACAAAAGTTCCAAGCAACATCAAGTTGGCAAATATGGAGGTGAAAGACAGAATCCTAGAGAATATGAGGAATTTGTCCAACCACCTAGTCAAACTGAGAAAGTACCAAAGGGTGCTGTTGTGAGGCCGAAAGGGGATCATCAAGAGGAGGCAAGGACAGTGAGGGCAATTCCAAAGCTACAAGGCGAGCAAGAGAAGAATGAACAAAGAATGGGAACAATCCCAAAGCTGCTAGATCATGAGATAGATATGAGTTCGTTAGATGTATATTCCATGCCTTCACCAGCACCTCCTCCACCTCCACCACTCACTACTGAGAGTGCGATTGTTGAACCAACCTCATTCCACAAAGGGGCTAACTTCAATCCTCCCAAAAAAAGTCCAGTTCCTCCCACTTTTGCTAAAACTTTCACCATTGCATCCCTACAACAATATACAAATAGCTTTTCTCAAGACAATCTTATAGGTTTAGGAATGCTGGGGACTGTGTATAAGGCAGAACTTCCTGATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTAATGACCAAACAGATGATGAGTTTCTTGATTTGATAAACAACATTGACAGAATCCGGCATGCAAATATTGTTGAGCTTATTGGATACTGTACCGAGCATGGTCAAAGGCTTCTTATTTATGAGTACTGTAGTAATGGTTCGCTGCAGGATGCACTCCATTCCGATGATGAATTCAAAACAAGACTGTCATGGAATGCTCGTATCCGGATAGCACTTGGTGCAGCTAGAGCCTTAGAGTACTTGCATGAGCAGTGTCAGCCACCTGTGGTACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATGTTTCTGTTCGTCTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGTTTTGTAAGTCAGCTCTCAGGACAACTTCTAGCAGCTTATGGCTATGGAGCTCCAGAGTTTGAGTCAGGAATTTACACATACCAGAGTGATGTTTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTACGACAAAACACGAGCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCACAACTGCATGACATTGATGCATTATCAAAGATGGTTGATCCTTCTCTGAAAGGAGATTATCCTGCGAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCGGAGCCAGAATTTAGGCCAGCAATGTCAGAAGTTGTCTTGTACTTGATAAATATGATCAGGAAGGAATCTCAGCAAAGTGAATAA 2382 0.4223 MVRRLLSRIDLGRTGEERSGSQYKRVKIHGEVLLGFLFICIVQFSHADTDPSDVAAINNLYTALGNPVLPGWVPSGGDPCGQGWQGVRCNGSVIQEITLNGANLGGELGDSLGSFVSIRAIVLNNNHIGGSIPSSLPVTLQHFFLSDNQFIGSIPASLSSLAGLTDMSLNDNLLTGEIPDAFQSLTQLINLDLSNNNLSGELPPSMENLSALTSVHLQNNNISGTLDVLQDLPLRDLNVENNQFVGPIPPKLLSIPNFRNDGNPFNLNVNATISPARQPHSPVPVSPPGTVVSGTPSSGRLPTKPTDGPTAAKESNSVKSKKNTKRVVWISISSILMFVIVVLGLLLFVPRCSRREQVNKSSKQHQVGKYGGERQNPREYEEFVQPPSQTEKVPKGAVVRPKGDHQEEARTVRAIPKLQGEQEKNEQRMGTIPKLLDHEIDMSSLDVYSMPSPAPPPPPPLTTESAIVEPTSFHKGANFNPPKKSPVPPTFAKTFTIASLQQYTNSFSQDNLIGLGMLGTVYKAELPDGKILAVKKLDKRVSNDQTDDEFLDLINNIDRIRHANIVELIGYCTEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNARIRIALGAARALEYLHEQCQPPVVHRNFKSANILLDDDVSVRLSDCGLAPLITKGFVSQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDKTRARGEQFLVRWAIPQLHDIDALSKMVDPSLKGDYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLINMIRKESQQSE 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02967 793 Gene3D Transferase(Phosphotransferase) domain 1 585 793 - -
Viun5g02967 793 MobiDBLite consensus disorder prediction 272 320 - -
Viun5g02967 793 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 474 584 - -
Viun5g02967 793 Gene3D Phosphorylase Kinase; domain 1 480 584 - -
Viun5g02967 793 MobiDBLite consensus disorder prediction 356 408 - -
Viun5g02967 793 Pfam Leucine rich repeat 139 198 IPR001611 GO:0005515
Viun5g02967 793 SUPERFAMILY L domain-like 49 257 - -
Viun5g02967 793 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 36 179 IPR046959 -
Viun5g02967 793 MobiDBLite consensus disorder prediction 288 320 - -
Viun5g02967 793 Gene3D Ribonuclease Inhibitor 50 275 IPR032675 -
Viun5g02967 793 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 585 793 - -
Viun5g02967 793 SUPERFAMILY Protein kinase-like (PK-like) 481 781 IPR011009 -
Viun5g02967 793 Pfam Protein tyrosine and serine/threonine kinase 510 779 IPR001245 GO:0004672|GO:0006468
Viun5g02967 793 ProSiteProfiles Protein kinase domain profile. 507 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02967 793 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 50 276 - -
Viun5g02967 793 Pfam Leucine rich repeat N-terminal domain 51 90 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02967 Viun-Chr5 41002179 41011445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02967 39 792 Strubbelig Receptor Gene Family AT4G03390 60.156 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Viun5g02967 PK_Tyr_Ser-Thr 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02967 - - gmx:100811490 1319.29