Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02966 ATGGTAAGACGATTGCTTTCAAGGATTGATCTTGGAAGAACGGGTGAGGAGAGATCTGGCTCACAGTACAAGAGAGTGAAGATCCATGGCGAAGTTCTTTTGGGATTTCTGTTCATCTGCATAGTCCAGTTTTCACATGCAGATACTGATCCCTCTGATGTTGCAGCAATAAATAACTTATATACTGCATTGGGCAACCCTGTTCTTCCCGGGTGGGTTCCTAGTGGAGGTGATCCGTGCGGACAAGGGTGGCAAGGTGTTCGATGTAATGGCTCAGTAATTCAAGAAATAACTCTGAATGGTGCAAACTTGGGAGGAGAACTGGGTGACAGCTTAGGAAGTTTTGTTTCTATCAGAGCAATAGTTCTAAACAACAATCACATTGGGGGAAGTATTCCATCCAGTTTGCCAGTCACTTTGCAACACTTCTTTCTTTCAGATAACCAGTTCATCGGAAGTATTCCAGCCTCTTTATCCTCGTTGGCTGGATTGACTGACATGTCTCTTAACGACAATCTTTTAACAGGAGAAATACCAGATGCATTTCAGTCTCTTACTCAATTGATCAATCTAGATTTGTCTAATAATAATTTGAGTGGGGAATTGCCTCCATCTATGGAGAATTTGTCAGCTCTGACCAGCGTACATTTACAGAACAATAACATCTCTGGTACCCTGGATGTTTTACAAGACCTTCCGCTGCGAGATTTGAATGTTGAGAACAACCAGTTTGTTGGACCAATACCCCCGAAGCTGTTAAGCATACCTAACTTCAGAAATGATGGAAACCCGTTTAATCTTAATGTCAATGCTACTATATCCCCGGCACGTCAACCTCATTCTCCAGTGCCAGTATCGCCACCAGGAACTGTGGTTTCTGGGACTCCATCATCTGGACGTTTACCTACCAAACCTACTGATGGACCAACTGCAGCAAAGGAATCAAATTCTGTGAAATCGAAAAAGAACACCAAGAGGGTGGTTTGGATATCTATTTCTAGTATATTGATGTTTGTTATTGTAGTACTGGGACTTCTTCTCTTTGTTCCAAGATGTAGTAGAAGAGAACAGGTTAACAAAAGTTCCAAGCAACATCAAGTTGGCAAATATGGAGGTGAAAGACAGAATCCTAGAGAATATGAGGAATTTGTCCAACCACCTAGTCAAACTGAGAAAGCAGTACCAAAGGGTGCTGTTGTGAGGCCGAAAGGGGATCATCAAGAGGAGGCAAGGACAGTGAGGGCAATTCCAAAGCTACAAGGCGAGCAAGAGAAGAATGAACAAAGAATGGGAACAATCCCAAAGCTGCTAGATCATGAGATAGATATGAGTTCGTTAGATGTATATTCCATGCCTTCACCAGCACCTCCTCCACCTCCACCACTCACTACTGAGAGTGCGATTGTTGAACCAACCTCATTCCACAAAGGGGCTAACTTCAATCCTCCCAAAAAAAGTCCAGTTCCTCCCACTTTTGCTAAAACTTTCACCATTGCATCCCTACAACAATATACAAATAGCTTTTCTCAAGACAATCTTATAGGTTTAGGAATGCTGGGGACTGTGTATAAGGCAGAACTTCCTGATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTAATGACCAAACAGATGATGAGTTTCTTGATTTGATAAACAACATTGACAGAATCCGGCATGCAAATATTGTTGAGCTTATTGGATACTGTACCGAGCATGGTCAAAGGCTTCTTATTTATGAGTACTGTAGTAATGGTTCGCTGCAGGATGCACTCCATTCCGATGATGAATTCAAAACAAGACTGTCATGGAATGCTCGTATCCGGATAGCACTTGGTGCAGCTAGAGCCTTAGAGTACTTGCATGAGCAGTGTCAGCCACCTGTGGTACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATGTTTCTGTTCGTCTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGTTTTGTAAGTCAGCTCTCAGGACAACTTCTAGCAGCTTATGGCTATGGAGCTCCAGAGTTTGAGTCAGGAATTTACACATACCAGAGTGATGTTTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTACGACAAAACACGAGCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCACAACTGCATGACATTGATGCATTATCAAAGATGGTTGATCCTTCTCTGAAAGGAGATTATCCTGCGAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCGGAGCCAGAATTTAGGCCAGCAATGTCAGAAGTTGTCTTGTACTTGATAAATATGATCAGGAAGGAATCTCAGCAAAGTGAATAA 2385 0.4226 MVRRLLSRIDLGRTGEERSGSQYKRVKIHGEVLLGFLFICIVQFSHADTDPSDVAAINNLYTALGNPVLPGWVPSGGDPCGQGWQGVRCNGSVIQEITLNGANLGGELGDSLGSFVSIRAIVLNNNHIGGSIPSSLPVTLQHFFLSDNQFIGSIPASLSSLAGLTDMSLNDNLLTGEIPDAFQSLTQLINLDLSNNNLSGELPPSMENLSALTSVHLQNNNISGTLDVLQDLPLRDLNVENNQFVGPIPPKLLSIPNFRNDGNPFNLNVNATISPARQPHSPVPVSPPGTVVSGTPSSGRLPTKPTDGPTAAKESNSVKSKKNTKRVVWISISSILMFVIVVLGLLLFVPRCSRREQVNKSSKQHQVGKYGGERQNPREYEEFVQPPSQTEKAVPKGAVVRPKGDHQEEARTVRAIPKLQGEQEKNEQRMGTIPKLLDHEIDMSSLDVYSMPSPAPPPPPPLTTESAIVEPTSFHKGANFNPPKKSPVPPTFAKTFTIASLQQYTNSFSQDNLIGLGMLGTVYKAELPDGKILAVKKLDKRVSNDQTDDEFLDLINNIDRIRHANIVELIGYCTEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNARIRIALGAARALEYLHEQCQPPVVHRNFKSANILLDDDVSVRLSDCGLAPLITKGFVSQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDKTRARGEQFLVRWAIPQLHDIDALSKMVDPSLKGDYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLINMIRKESQQSE 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02966 794 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 36 789 IPR046959 -
Viun5g02966 794 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 586 794 - -
Viun5g02966 794 MobiDBLite consensus disorder prediction 272 320 - -
Viun5g02966 794 SUPERFAMILY L domain-like 49 257 - -
Viun5g02966 794 MobiDBLite consensus disorder prediction 288 320 - -
Viun5g02966 794 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 475 585 - -
Viun5g02966 794 Gene3D Ribonuclease Inhibitor 50 275 IPR032675 -
Viun5g02966 794 Gene3D Phosphorylase Kinase; domain 1 481 585 - -
Viun5g02966 794 Gene3D Transferase(Phosphotransferase) domain 1 586 794 - -
Viun5g02966 794 MobiDBLite consensus disorder prediction 356 409 - -
Viun5g02966 794 Pfam Leucine rich repeat 139 198 IPR001611 GO:0005515
Viun5g02966 794 SUPERFAMILY Protein kinase-like (PK-like) 482 782 IPR011009 -
Viun5g02966 794 Pfam Protein tyrosine and serine/threonine kinase 511 780 IPR001245 GO:0004672|GO:0006468
Viun5g02966 794 ProSiteProfiles Protein kinase domain profile. 508 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02966 794 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 50 276 - -
Viun5g02966 794 Pfam Leucine rich repeat N-terminal domain 51 90 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02966 Viun-Chr5 41002178 41011445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02966 39 793 Strubbelig Receptor Gene Family AT4G03390 60.026 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Viun5g02966 PK_Tyr_Ser-Thr 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02966 - - gmx:100811490 1314.67