Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02951 ATGGCTGCAGCGAACAGTGGGAAATTCGATGTGGGAGATGAAACTCACAATTGTTCCGAAAAGGGAAGTGAAAGCGTTGATTGGGAGATTGAAAAGAGAAACGGCGTGGGTTCAAGCTCTCAGAGGCGTCAATGGAAGCCAGTTTTTGATGATACTTCCATTTCACATAATAGACCTCTGAAGAAAATCCGGAGCCCCGATCGGCATGAAACAAACCAATCTTCCTCCTCTTCTTCTTCTTCTGTTCCTTTTCAACCTTCTCCTCTCTCTGCCCCTCCCTCATCCTCTTCCAGAATCGTGTTCCCTTTCGCCTTCAACGGTTCCCAACACCCAATGCAATTCCCGCACCAATTCGGAGCCGCAAATTCACCTTTCCCTCACCCCTCTTTCCAAAACCACCAACAGCAGATGATATCATTCGGGTCCCAACAACAAAACCTTCCCTTTCCACCAATCATGGCCCGAGATTCTTCTCTTCCACACCACCACCACCATCATCAACAGCATCCGCAGCAACTTCTTCAGCATTGGAGAGACGCTCTGAGTCTAAGTCCCAGAGGAATGTTTACCCACTTGGGGCCAGATGGAAGGCCATTGTTCAGGCCTCCAACGCAGCCCATAAACACCACCAAGCTCTACAGAGGAGTGAGGCAACGCCATTGGGGAAAATGGGTCGCTGAAATTCGTCTTCCTCGAAACAGAACGCGTCTCTGGCTAGGCACATTTGACACGGCGGAGGACGCCGCCATGGCCTACGACCGCGAAGCCTTCAAACTCCGAGGAGAAAATGCCAGACTCAATTTCCCCGAACTGTTCCTCAACAAGGACAAAAACGAACAAGTTCAAGAAGAAGCTTCTTCACCTGTTCAAGACCAGCATGAACAAAAACCTGTTCCTCTAGGCCGTGACATGCCAAGAGAAGAGTCTAATGAGAATGACTCGGGAATTGGATCGAGCGACGCCACTGTGAGCGATGAGGTTCATGCTGCTGCTCCTTCTGCAGAAGGAGGTGAAGGGGTTTCTCAGGAACTTGTTTGGGGAGAAATGTCTGCATGGTTCAATGCTATTCCTGCAGCTTGGGGACCCGGTAGCCCTGTGTGGGATGATTTGGATCCCACCAATAATCTTCTTTACCAATCACACGTTCCTTTTTCAAATTCCAATCAGCAACAGATCAATGATGCCTCTGATGATGCTCAGAGACAAGAACACAACACGGAATCAGGTTACTTATGGAAGGATCAGGATTGA 1251 0.4916 MAAANSGKFDVGDETHNCSEKGSESVDWEIEKRNGVGSSSQRRQWKPVFDDTSISHNRPLKKIRSPDRHETNQSSSSSSSSVPFQPSPLSAPPSSSSRIVFPFAFNGSQHPMQFPHQFGAANSPFPHPSFQNHQQQMISFGSQQQNLPFPPIMARDSSLPHHHHHHQQHPQQLLQHWRDALSLSPRGMFTHLGPDGRPLFRPPTQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKDKNEQVQEEASSPVQDQHEQKPVPLGRDMPREESNENDSGIGSSDATVSDEVHAAAPSAEGGEGVSQELVWGEMSAWFNAIPAAWGPGSPVWDDLDPTNNLLYQSHVPFSNSNQQQINDASDDAQRQEHNTESGYLWKDQD 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02951 416 FunFam Ethylene-responsive transcription factor 2 211 270 - -
Viun5g02951 416 MobiDBLite consensus disorder prediction 279 340 - -
Viun5g02951 416 SUPERFAMILY DNA-binding domain 212 270 IPR016177 GO:0003677
Viun5g02951 416 ProSiteProfiles AP2/ERF domain profile. 212 269 IPR001471 GO:0003700|GO:0006355
Viun5g02951 416 MobiDBLite consensus disorder prediction 34 51 - -
Viun5g02951 416 Gene3D AP2/ERF domain 212 270 IPR036955 GO:0003700|GO:0006355
Viun5g02951 416 Pfam AP2 domain 213 261 IPR001471 GO:0003700|GO:0006355
Viun5g02951 416 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 27 370 - -
Viun5g02951 416 CDD AP2 211 271 IPR001471 GO:0003700|GO:0006355
Viun5g02951 416 MobiDBLite consensus disorder prediction 13 31 - -
Viun5g02951 416 PRINTS Ethylene responsive element binding protein signature 235 251 IPR001471 GO:0003700|GO:0006355
Viun5g02951 416 PRINTS Ethylene responsive element binding protein signature 213 224 IPR001471 GO:0003700|GO:0006355
Viun5g02951 416 MobiDBLite consensus disorder prediction 1 95 - -
Viun5g02951 416 MobiDBLite consensus disorder prediction 55 69 - -
Viun5g02951 416 MobiDBLite consensus disorder prediction 397 416 - -
Viun5g02951 416 MobiDBLite consensus disorder prediction 296 310 - -
Viun5g02951 416 SMART rav1_2 212 275 IPR001471 GO:0003700|GO:0006355
Viun5g02951 416 MobiDBLite consensus disorder prediction 70 95 - -
Viun5g02951 416 MobiDBLite consensus disorder prediction 384 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02951 Viun-Chr5 40841660 40843706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02951 51 386 AP2-EREBP Transcription Factor Family AT2G20880 43.402 4.96e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun5g02951 AP2 2.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02951 - - gmx:100809887 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02951 5 40841660 40843706 Viun5g02951 5 40841660 40843706 ECH