Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02935 ATGGCGTCTTTACCGTCGGGTCTCGCCAACGGTGCTTCCAAGGGTTTTGATTTTACTTCTGGTGACATCCTATGTTCCTACGAGGACAATAATACCAACAACGGCTCTTCTAACGGCATTTACATCGATACCGCCAAGGATTTTCATGCATCGAGGATGGCAAAAACATCCACAGTTCCTGCTACTGCCTATAGTTCGTCCGAGGGTTCTTTGAGCCAGGATGTGATTGTCACTGTTGAGAAGACTATGAAAACATGTACCGATAACCTTCTGCGGTTTCTTGAGGGAATCAGTTCAAGGCTGTCAAACTTGGAATTATATTGTTACAATCTTGACAAATCAATTGGAGCAATGCGATCTGATTTAAACAGTGATCATGAAGAGGCAGATTCAAAACTCAAATCTCTTGATAAACACCTTCAAGAAGTACACAGGTCTGTGCAAATTTTGAGAGACAAGCAAGAGCTGGCAGAGACTCAGAAAGAATTAGCCAAGCTTCAACTCATTCGTAAAGAATCATCTTCCTCAAGCCATACACAGTCTAATGAGGAGAGATCTTCACCTTCTTCCATTGATCCAAGAAGAATTGATAATGCATCTGACACACACAACCTAGAGTTAGCCCTTGCCTTACCTCATCAAGTGCCACCCCCAAATGTGAGTCAAGCGACTCAACAACCTCGTCATTATCTGATGCCGCCTACCCCCTCCAATCCACAAGCTTGGAATCAATATTTGGCGTGTGATCCACACTATCGAATTCCACCATCAACTTCATCGTCTCCGGTAACCCAATCCCCACCCGGGCAACAGTTATCTCAGTATCAGCAGCCACAGCACCAACAATTGCAATGGCCTCAACAGTTACCACCACAGCAGGTGGATGTGCAATCTTCCCAACCACCCTCAATCCAGTCTCAAGTAAGACCCCCTGTCACAAATGTTTATACTCCTTATTCTACCAGCCAAGCTACAAATCATCTTCCGACAGAAACACCACCACTACCACTACGACCACCACCACGGAACAGCATGCCGATGCAACTCTCTTATTCAGGGATTCCACCTCAAGTACCCAGCCATGGTGAGGTTCTACCACATGGATACAGTGGAGGTGGTGGAACAGTTCCCCAACAACCTACGCTCCAACACATGAAGGGCTCTTTTTCAGCACAACCACATGTGTATGGAACTAGCGGGATCTACACCACTCATCCTCCTGCTAGTTCCTTCACGGTGTATGATGGTGAGAATGCAAGATCACATTATCCGTCACAACAACAACCTTCTCATACTGCTCAAGGTGGATATCCTCCAACTAGTGCTTCCCTTCACAACTCTGCACCACATAATTTTATGGTTCAGAATTCTAGCCAGTCACAATTTCTTCGAGTCAATCCCAACAATGAACTGATCGAGAAATTTGTGAGCATAGGATATAGAGGTGATCACGTGATAAGCACGATCCAGAGGATGCAAGAAACTGAGCAGCATATTGATTTTAATTCTGTACTTGACCGGTTGAAGGTGCATAATCCTCAGAGGGGATGGTCAGGGTGA 1560 0.4538 MASLPSGLANGASKGFDFTSGDILCSYEDNNTNNGSSNGIYIDTAKDFHASRMAKTSTVPATAYSSSEGSLSQDVIVTVEKTMKTCTDNLLRFLEGISSRLSNLELYCYNLDKSIGAMRSDLNSDHEEADSKLKSLDKHLQEVHRSVQILRDKQELAETQKELAKLQLIRKESSSSSHTQSNEERSSPSSIDPRRIDNASDTHNLELALALPHQVPPPNVSQATQQPRHYLMPPTPSNPQAWNQYLACDPHYRIPPSTSSSPVTQSPPGQQLSQYQQPQHQQLQWPQQLPPQQVDVQSSQPPSIQSQVRPPVTNVYTPYSTSQATNHLPTETPPLPLRPPPRNSMPMQLSYSGIPPQVPSHGEVLPHGYSGGGGTVPQQPTLQHMKGSFSAQPHVYGTSGIYTTHPPASSFTVYDGENARSHYPSQQQPSHTAQGGYPPTSASLHNSAPHNFMVQNSSQSQFLRVNPNNELIEKFVSIGYRGDHVISTIQRMQETEQHIDFNSVLDRLKVHNPQRGWSG 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02935 519 MobiDBLite consensus disorder prediction 414 448 - -
Viun5g02935 519 Coils Coil 149 169 - -
Viun5g02935 519 MobiDBLite consensus disorder prediction 217 244 - -
Viun5g02935 519 MobiDBLite consensus disorder prediction 169 187 - -
Viun5g02935 519 Pfam UBA-like domain (DUF1421) 469 512 IPR010820 -
Viun5g02935 519 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 10 519 - -
Viun5g02935 519 MobiDBLite consensus disorder prediction 168 197 - -
Viun5g02935 519 MobiDBLite consensus disorder prediction 211 337 - -
Viun5g02935 519 MobiDBLite consensus disorder prediction 254 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02935 Viun-Chr5 40721112 40723865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02935 75 245 Trihelix Transcription Factor Family AT5G14540 32.164 3.87e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02935 - - vum:124844872 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02935 5 40721112 40723865 Viun5g02935 5 40721112 40723865 ECH