Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02929 ATGCAGCAGCCAAGTTCAATTGGGCAAAGTTTTCCTTCCATTTTCAGTCCCTTGCCAATGTCTCCATTGAAGCTCCTTGTCATTCTTCTTCACACTGCAACCACTTTGTGTTCAGTTTCCACCACCGAATTTGTCTATAACACAAACTTCAACTCCACAAACATCATTTTATATGGAGATGCCTCTGTAGAAACCTCCATTCTGACTCTCACAAATTCGAGTTTCTTTTCCATTGGCCGTGCTTTTTACCCTCACAAAATACCTACCAAAAAAGCCAACTCCCCCACTTTACTCCCCTTTGCAACCTCCTTCATTTTCTCAATTGCTCCCATCAAAAACTTTTTCACTGGCCATGGCTTTGTCTTCCTATTCACATCATCAAGAGGTGTAAATGGTACCACTTCAGCAGAGTATATCGGTCTTTTCAATCGTAGCAACGAAGGCAATCCTCAGAACCATGTTTTTGGAGTTGAGTTTGATATAGTCCAAAATCCAGAAGAGTTCCATGATATTAGTGATAATCATGTCGGTGTTGACATAAACTCGCTTCGCTCTTTAACTTCACATGAAGCTGGTTATTGGGGAGGAAAAGGTGACAAAAAGTTTAAGGTGTTGGAGCTAAACAATGGACAGAACTATCAGGTATGGATTGAATTTATGCACTCTCAACTTAACGTTACCATGACTCGGGCAGGACTAAAGAAGCCTAGAGTGCCTCTTATCAGTAGCAATGTAAGCCTTTCAGGGGTTCTTATGGATGAAACATACGTTGGATTCACTGCAGCAACAGGGAAGATAGTAGACAGTACTAGGATTCTTGCTTGGAGTTTTAGTAATTCAAATTTTTCAATAGGTGATGCTTTGGTGACAGAAAATTTGCCTTCATTTGTACATCATAAAAGGTGGTTTTCTGATAGGCGAGTTTTGGCTGCAGGTGTGACCATTATTTTGTGTGTGTTAATCACTGGCTGTGGTTTTGTAGTTTTTTTCATCCTGCGCAGAGGCAAGACACTAGAAAAAGTTGAGGACTGGGAACTGGAGTATTGGCCTCATAGGATTGGTTTCCATGATATTTATGCAGCAACAAGAGGGTTTTCTGAAGAGAATGTGGTTGCTGTTGGAGGGAACGGGAAGGTGTATAAAGGGGTTTTGCATGGAGCAGAAGTTGCAGTGAAGAGAATCCCTCAAGAAAGGGAAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAATTCTGGGCAGAATGAAGCACAAAAATTTAGTAGGATTGAGAGGTTGGTGCAAAAAGGAAAGGGGAAACTTGATTCTAGTTTATGACTTCATGAGCAAGGGAAGTTTAGACAAAAGGATATTTGAGTGTGAAGAGAGAATGGTGCTGACATGGGAAGAGAGGATTCAAGTTCTGAAAAACGTAGCCACAGGGATTCTGTACCTGCATGAAGGTTGGGAAGTTAAGGTCTTGCATGGTGACATTAAAGCATGCAATGTTCTTCTTGACAAGGACATGAATGCAAGGCTGGGGGATTTTGGATTGGCTCGTATGCATGATCATCATGGACAAGTTGCAAGCACGACAAGAGTAATTGGGACAATAGGATACATTGCTCCTGAAGTGATTCGAACAGGAACAGTGTCAACTATGTCTGATGTGTTTGGTTTTGGAATATTGGTACTGGAAGTAATTTGCGGGCGAAGATCAATTGAAGAACATAAACCAGGTCTTACTGATTGGTTGGTGTCTCTAATGGTGCAAGGCCAATTGCAAAGTGCTGTTGATGAAAGGTTGAAGGCTAAATGGGGATACAGCGCAGAGGAAGCTGAAAGATTGCTTCATTTGGGTTTGTTGTGTTCAGATTCTGACCCTAGTATTCGACCAACGATGAGGCAGGTTGTGAAAATGTTGGAAGGGGAAATGGACAACACTGATGAAGAAAACATGGAGATGAGTTTGCTTGGAAAAGTAAAATCAGCTGCAATGTGGTCTAAACCTGAATGTGCTTTTCCTTGCAGTGGTTACCCAACTTTTGATGAAATTAAGATGTTCAGTTTCAGTTCTTGGACTTCTGGGAGTGGCTCGAGTACTTTTCCAGGATCAGAGTCAGAAATCATCAGAGTAAACAGATGA 2124 0.4162 MQQPSSIGQSFPSIFSPLPMSPLKLLVILLHTATTLCSVSTTEFVYNTNFNSTNIILYGDASVETSILTLTNSSFFSIGRAFYPHKIPTKKANSPTLLPFATSFIFSIAPIKNFFTGHGFVFLFTSSRGVNGTTSAEYIGLFNRSNEGNPQNHVFGVEFDIVQNPEEFHDISDNHVGVDINSLRSLTSHEAGYWGGKGDKKFKVLELNNGQNYQVWIEFMHSQLNVTMTRAGLKKPRVPLISSNVSLSGVLMDETYVGFTAATGKIVDSTRILAWSFSNSNFSIGDALVTENLPSFVHHKRWFSDRRVLAAGVTIILCVLITGCGFVVFFILRRGKTLEKVEDWELEYWPHRIGFHDIYAATRGFSEENVVAVGGNGKVYKGVLHGAEVAVKRIPQEREEGMREFLAEVSILGRMKHKNLVGLRGWCKKERGNLILVYDFMSKGSLDKRIFECEERMVLTWEERIQVLKNVATGILYLHEGWEVKVLHGDIKACNVLLDKDMNARLGDFGLARMHDHHGQVASTTRVIGTIGYIAPEVIRTGTVSTMSDVFGFGILVLEVICGRRSIEEHKPGLTDWLVSLMVQGQLQSAVDERLKAKWGYSAEEAERLLHLGLLCSDSDPSIRPTMRQVVKMLEGEMDNTDEENMEMSLLGKVKSAAMWSKPECAFPCSGYPTFDEIKMFSFSSWTSGSGSSTFPGSESEIIRVNR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02929 707 FunFam L-type lectin-domain containing receptor kinase S.4 40 285 - -
Viun5g02929 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Viun5g02929 707 CDD STKc_IRAK 374 636 - -
Viun5g02929 707 Pfam Legume lectin domain 42 281 IPR001220 GO:0030246
Viun5g02929 707 SMART serkin_6 365 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02929 707 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 327 440 - -
Viun5g02929 707 Gene3D Phosphorylase Kinase; domain 1 332 440 - -
Viun5g02929 707 ProSiteProfiles Protein kinase domain profile. 365 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02929 707 PANTHER - 54 638 - -
Viun5g02929 707 FunFam L-type lectin-domain containing receptor kinase S.4 441 647 - -
Viun5g02929 707 Pfam Protein kinase domain 369 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02929 707 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 280 IPR013320 -
Viun5g02929 707 SUPERFAMILY Protein kinase-like (PK-like) 342 635 IPR011009 -
Viun5g02929 707 Gene3D - 40 285 - -
Viun5g02929 707 Gene3D Transferase(Phosphotransferase) domain 1 441 657 - -
Viun5g02929 707 MobiDBLite consensus disorder prediction 688 707 - -
Viun5g02929 707 CDD lectin_legume_LecRK_Arcelin_ConA 42 280 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02929 Viun-Chr5 40686302 40689069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02929 39 582 Receptor kinase-like Gene Family AT4G04960 55.456 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun5g02929 Pkinase 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02929 - - gmx:100804553 1187.94