Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02923 ATGAACGACTTCTATGCCCAACTCAACTCTCTTCTCCCTTCTCATAATCCCAAGGAAGCCATACCTCGGCGTGCTCAAATAGGTGAAGCGATGAAGTACATAAAAAGCCTGGAGACAAAACTGAAGATGGCGCAAGAGAAGAAGGAAAGGCTATTCGAAAAGAAGAAAAATCTTAGTGGCTGCACCTTGAATGCTTCTGAAGCACAACCAAAAATGGAGGTTCATGAAACGGGTTCTGCGATTCAAGTCATTCTGACATGTGGGATCGATAACAATTTCATTTTCTGTGAAATTCTTCGGATACTCAGCGAACTCAACGTGGAGGTCGTCACTGTCAATTCTACAATGGTGGGAGATTCAATGATCCATGCTGTGCAGGGTGAGGTTGCGCAATCTATGTTTCAATTCGGAGATAGCACAGTGAGCGAGAAGCTGAAATGGTTTGTGAATGGATCCTTCAGCGATATGGAAATAGATCTTGGATTGTGGGATTCTGGAATTGGTTTACCATTGATAACACCAGGGTGCTGCTTTCTGGATCCAACCCTAGACACTGGTTTACCATCGTATCCCTGCTAA 579 0.4404 MNDFYAQLNSLLPSHNPKEAIPRRAQIGEAMKYIKSLETKLKMAQEKKERLFEKKKNLSGCTLNASEAQPKMEVHETGSAIQVILTCGIDNNFIFCEILRILSELNVEVVTVNSTMVGDSMIHAVQGEVAQSMFQFGDSTVSEKLKWFVNGSFSDMEIDLGLWDSGIGLPLITPGCCFLDPTLDTGLPSYPC 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02923 192 Gene3D - 1 63 IPR036638 GO:0046983
Viun5g02923 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 54 IPR036638 GO:0046983
Viun5g02923 192 Coils Coil 27 54 - -
Viun5g02923 192 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02923 Viun-Chr5 40542145 40543096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02923 1 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 31.765 4.44e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02923 - - vun:114184712 389.808