Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02911 ATGAAGCGTTATGTTTATATTGATGATGATGAATCATCTCATGATATATACTGTGATAATCGTATATCAAACAGAAAATATACCGTATTAAACTTTCTTCCAAAAAATTTATGGGAACAGTTCAGCCGGTTCATGAATCAGTACTTTTTGCTCATAGCTTGCCTACAGTTATGGCCTCTCATTACTCCAGTAAATCCTGCCAGTACATGGGGTCCACTTATCTTTATTTTTGCTGTCTCTGCATCAAAAGAGGCGTGGGATGATTACAATAGATATCTTTCAGACAAAAAGGCAAATGAGAAGGAAGTCTGGGTTGTGAAGAAGGGCATCAAGAAACATATTGAAGCCCAGGATATTCATGTAGGTAATATAGTATGGCTACGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTGATTGGTACCTCTGATCCTCAAGGAGTTTGCTATGTAGAGACTGCTGCGTTGGATGGTGAAACGGATTTAAAGACACGGGTCATACCTTCTGCTTGTGCGGGAATTGATGTTGAACTATTGCACAAAATTAAGGGTGTAATTGAGTGTCCTTGTCCAGATAAAGATATCAGGAGATTTGATGCAAACATGCGGTTATTTCCCCCATTTATTGATAATGATATATGCCCTTTAACCATTAAAAACACCATTCTTCAGTCATGTTACTTGAGAAACACAGAGTGGGCTTGTGGAGTGGCTGTCTATACAGGTAATGAAACCAAAATGGGCATGAGTAGAGGTATACCAGAACCAAAGCTCACTGCTATGGATGCCATGATTGACAAGTTGACTGGCGCTATTTTTATATTCCAAATAGTTGTTGTTCTTGTTCTTGGCATAGCAGGGAATGTTTGGAAGGAGACAGAAGCTAAGAAGCAATGGTATGTTCTTTACCCTCATGAAGGTCCGTGGTATGAACTGTTGGTCATCCCTTTGCGGTTTGAGCTTCTCTGTTCCATCATGATACCCATTTCAATTAAGGTATCTCTTGATTTGGTGAAGAGCTTGTATGCAAAATTTATTGACTGGGACAATCAGATGATTGACCATGAGACTAGCATTCCTTCCCATGCAACAAATACAGCGATAAGTGAGGACCTGGGACAAGTTGAGTACATTTTGACTGACAAAACAGGAACGCTGACCGAGAATAAGATGATATTCAGAAGATGTTGTATTGGTGGCAATTTCTACGGAAATGAAAATGGAGATGCATTGAAGGATGTTGAGCTTATCAATGCTGTGTCAAGTGGTTCTTCAGATGTTGTACGATTTCTTACAATTATGGCAATATGTAATACTGTCATACCTACGCGAAGCAAAACTGGAGATATCTTGTATAAAGCACAGTCTCAAGATGAGGATGCCCTTGTTCAGGCTGCTGCTCAATTGCATATGATTTACTTTAATAAGAGTGGAAATATTCTTGAAGTCAAGTTCAACTCTTCAATACTTCAGTATGAAGTCCTGGAAACTCTAGAGTTCACCTCTGATAGGAAAAGAATGTCGGTAGTATTGAAAGATTGCCAAAATGGAAAGATCCTTCTATTGTCGAAGGGAGCAGATGAGGCTATTCTTCCGTTTGCTCGTGCTGGGCAGCAGACTCGACATTTCATTGAAGCTGTGGAGCAGTATGCTCACTTGGGATTGCGTACATTATGTTTGGGTTGGCGTGAGTTAAAAAAAGATGAATATCGAGAATGGTCTTTGATGTTTAAAGAGGCCAATAGCACTTTGGTTGATAGGGAGTGGAGAGTAGCTGAGGTCTGTCAACGAGTAGAACATGACTTGGAAATTCTTGGTGTAACAGCAATAGAGGATCGTTTACAGGATGGAGTGCCTGAAACGATAGAAACTCTAAGAAAAGCTGGAATAAATTTTTGGATGCTAACTGGAGATAAGCAGAATACAGCAATACAAATAGCTCTGTCATGTAATTTTATTTCCCCAGAACCAAAGGGACAGCTTCTATCAATTGATGGAAAAACAGAGGAAGAGGTCTGTAGGAGTTTAGAAAGAGTGCTACGAACTATGCGGATAACTACCTCAGAACCCAAGGATGTGGCTTTTGTTGTTGATGGTTGGGCACTTGAGATCGCACTTACTCACTATCGTAAAGCTTTCACTGAGCTGGCAGTTTTTTCGAGGACTGCTATATGTTGTCGTGTGACACCATCACAAAAAGCACAGCTTGTTCAGATCTTAAAATCATGTGATTATAGAACATTGGCTATTGGTGATGGTGGAAATGATGTAAGGATGATACAACAAGCTGATATTGGTGTGGGTATCAGTGGCAGAGAAGGATTGCAGGCAGCAAGAGCAGCTGATTACAGTATTGGAAAGTTTAGATTTCTGAAGAGATTAATTCTGGTCCATGGCCGCTACTCATACAACCGCACAGCATTTCTTTCTCAATATTCATTCTACAAATCCCTACTGATTTGCTTCATCCAAATCTTTTTTTCATTTATTTCAGGTGTCTCTGGAACTAGCCTCTTCAATTCTGTTAGCTTGATGGCTTACAATGTTTTCTACACCAGTGTTCCTGTTCTAGTCAGCGTGCTTGACAAAGATCTTAGTGAGGAAACTGTAATGCAACATCCGCAAATTTTATTTTACTGCCAAGCGGGAAGGCTTCTGAATCCTAGTACATTTGCTGGATGGTTTGGTCGATCTCTCTTCCATGCAATAGTTGTATTTGTGATAAGCATACATGCCTACGCATATGATAAAAGTGAAATGGAGGAGGTTTCAATGGTTGCACTTTCGGGTTGTATATGGTTACAGGCTTTTGTAGTGACAATGGAGACCAATTCCTTTACTATATTGCAACATATGGCTATATGGGGTAATTTGGCTGCCTTTTATGTCATTAACTGGATCTTCAGCGCTCTTCCTTCATCAGGGATGTATACAATTATGTTTAAGTTGTGTCATCAGCCGTCATATTGGATAACAGTATCTCTCATGGTTGCGGCAGGGATGGGTCCCATTCTAGCTATCAAGTACTTCCGATATACTTACAGACCGAGCAAAATCAATACACTGCAGCAAGCTGAACGTGTGGGCGGTCCAATTTTGTCTCTTGGCCCCATTGAGCCTCAGCCGAGATCTATAGAGAAAGATGTTTCTACCTTGTCAATAACACAACCCAAAACCAGAAATCCTGTGTATGAACCTCTGTTGTCAGATTCCCCGAATGCCACCAGAAGATCTTTCGGATCAGGAACACCATTTGATTTTTTCCAGTCACAATCAAGATCATCTCTGTCTAACTACACAAGAAAGGATAACTGA 3315 0.4027 MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVKKGIKKHIEAQDIHVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRVIPSACAGIDVELLHKIKGVIECPCPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVYTGNETKMGMSRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKETEAKKQWYVLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDNQMIDHETSIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCIGGNFYGNENGDALKDVELINAVSSGSSDVVRFLTIMAICNTVIPTRSKTGDILYKAQSQDEDALVQAAAQLHMIYFNKSGNILEVKFNSSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPFARAGQQTRHFIEAVEQYAHLGLRTLCLGWRELKKDEYREWSLMFKEANSTLVDREWRVAEVCQRVEHDLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVFSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYAYDKSEMEEVSMVALSGCIWLQAFVVTMETNSFTILQHMAIWGNLAAFYVINWIFSALPSSGMYTIMFKLCHQPSYWITVSLMVAAGMGPILAIKYFRYTYRPSKINTLQQAERVGGPILSLGPIEPQPRSIEKDVSTLSITQPKTRNPVYEPLLSDSPNATRRSFGSGTPFDFFQSQSRSSLSNYTRKDN 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02911 1104 SFLD Haloacid Dehalogenase 362 801 - -
Viun5g02911 1104 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Viun5g02911 1104 MobiDBLite consensus disorder prediction 1060 1104 - -
Viun5g02911 1104 SUPERFAMILY HAD-like 374 805 IPR036412 -
Viun5g02911 1104 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Viun5g02911 1104 Pfam E1-E2 ATPase 99 292 - -
Viun5g02911 1104 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 577 IPR023299 GO:0000166
Viun5g02911 1104 FunFam Phospholipid-transporting ATPase 449 592 - -
Viun5g02911 1104 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Viun5g02911 1104 Gene3D - 439 590 IPR023299 GO:0000166
Viun5g02911 1104 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 1026 - -
Viun5g02911 1104 Pfam Cation transport ATPase (P-type) 436 531 - -
Viun5g02911 1104 Gene3D - 602 790 IPR023214 -
Viun5g02911 1104 SFLD p-type atpase 362 801 IPR044492 -
Viun5g02911 1104 MobiDBLite consensus disorder prediction 1060 1098 - -
Viun5g02911 1104 FunFam Phospholipid-transporting ATPase 602 789 - -
Viun5g02911 1104 NCBIfam phospholipid-translocating P-type ATPase 424 1023 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Viun5g02911 1104 CDD P-type_ATPase_APLT 19 907 - -
Viun5g02911 1104 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Viun5g02911 1104 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Viun5g02911 1104 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Viun5g02911 1104 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Viun5g02911 1104 NCBIfam HAD-IC family P-type ATPase 599 662 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun5g02911 1104 NCBIfam HAD-IC family P-type ATPase 717 834 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun5g02911 1104 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Viun5g02911 1104 FunFam Phospholipid-transporting ATPase 75 251 - -
Viun5g02911 1104 Gene3D - 75 251 - -
Viun5g02911 1104 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 1016 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02911 Viun-Chr5 40418376 40438453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02911 1 1104 Primary Pumps ATPases AT5G44240 85.456 0.0 2002
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02911 K01530 - gmx:100786505 2114.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02911 5 40418376 40438453 Viun5g02911 5 40418376 40438453 ECH