Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun5g02893 | ATGACGAAGCGAAAGCGAGAAGCGGAAACACCAGATGTGGCTGTTGATCACTACAAAATCCTTGAGGTCGAGAAGAATGCTAAAGAAGAGGAGCTGAGGAGATCGTACAAGAGACTCGCCATGAAATGGCACCCCGACAAAAATCTCACGAACAAGGAAGAGGCTGAATCCATGTTTAAAAAAGTATCTGAAGCGTATGAGGTGTTAAGTGATTCCCACAAGAGGGCACTTTTTGATTGTAGTCTAATGGCTCGGGTGGCACCTGCTGCTCCTGCTGCCTCTTCCACCCAGAAACCTCTCCAAAAAGCTCCTCCAATTGAGCGCAAGTTGTCTTGCACTCTTGAAGAATTATACACTGGAACCACCAAGAAGGTTAATATATGGAGGAAGTTCGGTGAACTTGGTGGTAAGGATGAGGGAGAGGTATTGGTAGTGGAAGTGAAGCCTGGTTGGAAGAATGGCACAAAGATAAAGTATTTGGAGATGGGAATTCGGGTGCCAAATATGATACCAGCTGATCTTGTTTTCATCATAGAAGAAGAACTTCACAGAGTTTATACTAGAGTTGGAGCCGACCTTCTGGTGACCAAAACGATATCCCTTGTTGAAGCCTTGACAGGGTACACTGTGAAACTGGTTACCCTTGATGGAAGAAACTTAACTGTGCCAATCGACAATGTTATTCATCCTGAATATGAAGAGATTGTTGAAAATGAAGGATTGCCTCACCACAAGGATCCAACAAAGAAGGGAAACTTGAGAATAAGGTTCAAAATCACATTCCCACCCGATCTCACTCTTCACCAGAAAGTCGAAATGCGGAAATTTTTGACAGACTGA | 840 | 0.4393 | MTKRKREAETPDVAVDHYKILEVEKNAKEEELRRSYKRLAMKWHPDKNLTNKEEAESMFKKVSEAYEVLSDSHKRALFDCSLMARVAPAAPAASSTQKPLQKAPPIERKLSCTLEELYTGTTKKVNIWRKFGELGGKDEGEVLVVEVKPGWKNGTKIKYLEMGIRVPNMIPADLVFIIEEELHRVYTRVGADLLVTKTISLVEALTGYTVKLVTLDGRNLTVPIDNVIHPEYEEIVENEGLPHHKDPTKKGNLRIRFKITFPPDLTLHQKVEMRKFLTD | 279 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun5g02893 | 279 | ProSiteProfiles | dnaJ domain profile. | 16 | 82 | IPR001623 | - | |
Viun5g02893 | 279 | Pfam | DnaJ C terminal domain | 106 | 262 | IPR002939 | - | |
Viun5g02893 | 279 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 102 | 194 | IPR008971 | GO:0006457|GO:0051082 | |
Viun5g02893 | 279 | Gene3D | - | 183 | 262 | - | - | |
Viun5g02893 | 279 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 16 | 277 | - | - | |
Viun5g02893 | 279 | CDD | DnaJ | 16 | 71 | IPR001623 | - | |
Viun5g02893 | 279 | Gene3D | - | 105 | 181 | - | - | |
Viun5g02893 | 279 | Gene3D | DnaJ domain | 2 | 99 | IPR036869 | - | |
Viun5g02893 | 279 | SUPERFAMILY | Chaperone J-domain | 15 | 84 | IPR036869 | - | |
Viun5g02893 | 279 | PRINTS | DnaJ domain signature | 36 | 51 | IPR001623 | - | |
Viun5g02893 | 279 | PRINTS | DnaJ domain signature | 18 | 36 | IPR001623 | - | |
Viun5g02893 | 279 | PRINTS | DnaJ domain signature | 54 | 74 | IPR001623 | - | |
Viun5g02893 | 279 | FunFam | Heat shock protein 40 | 103 | 181 | - | - | |
Viun5g02893 | 279 | ProSitePatterns | Nt-dnaJ domain signature. | 59 | 78 | IPR018253 | - | |
Viun5g02893 | 279 | FunFam | DnaJ subfamily B member 13 | 183 | 263 | - | - | |
Viun5g02893 | 279 | Pfam | DnaJ domain | 16 | 79 | IPR001623 | - | |
Viun5g02893 | 279 | SMART | dnaj_3 | 15 | 74 | IPR001623 | - | |
Viun5g02893 | 279 | CDD | DnaJ_C | 104 | 265 | - | - | |
Viun5g02893 | 279 | Coils | Coil | 18 | 38 | - | - | |
Viun5g02893 | 279 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 186 | 270 | IPR008971 | GO:0006457|GO:0051082 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun5g02893 | Viun-Chr5 | 40342030 | 40344040 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun5g02893 | 17 | 79 | C2H2 Transcription Factor Family | AT1G74250 | 41.791 | 3.10e-09 | 55.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun5g02893 | K09510 | - | mnt:21403932 | 259.225 |