Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02880 ATGACGATCAGTGTGGAGGAGTCGATAATGGTGCAACCCGCGGAGGCGACACCGCGAAAGGTGTTGTGGAACTCAGACTTAGATTTGCTGGTGGGGAATTACCACCTTCCCACCGTCTATTTCTACAAACCAAACGGGGCTTCCAATTTCTTCAACGCCAACATTCTGAAACAAGCTCTGAGTAAGACCCTCGTCCTTTTTAACCCAATGGCCGCCCGTCTCCGTCACGGTGAAGACCACCGTGTGGAGATTTATTGTGACGGTCAGGGTGTACTTTTCGTCGAGGCTCATGCCACCGTTGCCATGGACAACTTCATTCACACCTTTCACCATCGCAACCTTATTCCCGCGGTGGATTATTGTGCCGGCATCGAAACATATCCGATAGTGGTATTACAGGTAACATATTTCAAATGTGGAGGGGTGTCGTTAGGAGTCGGTATACAGCACCATGTAGTAGATGGAGCATCGAGTCTTCACTTCATCAATGCATGGTCCGATGTGGCTCGTGGCATTGACATTTCTGTTCCTCCATTTATTGACAGGACCTTACTTCGTGCCAGGGAGCCACCTCAACCAGCTTTTCCTCACCACGAATACCAGCTCTCACGACCCCGCATTAACACCACCACCACCACCAACACCGATGTGGTTGCTTCTATTCTAAAAGTGAGTGGTGAGCATGTCAACATCCTGAAGGGCAAATACAAAGAAGATGGCAACACAATGAAGTATAGCAGTTATGAGATGTTGGCAGCACATATATGGAGAAGTGTGTGCAGAGCAAGAGGGCTTCCTGATGAGGAGGAAACGAGACTGTATATTCCAATTGATGGAAGGTCAAGGCTGGAACCTGCTCTTCCTCCTGGTTACCTTGGCAATGTCATCTTCTCCACCATTCCCACAGCACTGGTTGGAGATCTGTTGTCGAAACCTACATGCTATGCTGCAAACAAAATCCATAATGCAATTATGAGAATGGACAACCCATATTTGAGGTCGGCTCTTGACTATCTACAGCTACAGCCTGATCTAAGTGCTCTTGTTCGTGGACCTCATACTTTTGGGACTCCAAATGTTGGTATCAATAGCTGGGCTAAGTTTCCAATCTATGATGCTGACTTTGGTTGGGGGAGACCAATCTTCATGAGACCTGGTTGGATTGCACACGAGGGTCTAGCAATCATAATTCCAAGCTCAGAAAATGATGGCACTTTGTATTTGGCAATCGCCCTACCGCCACATCATATATGA 1254 0.4753 MTISVEESIMVQPAEATPRKVLWNSDLDLLVGNYHLPTVYFYKPNGASNFFNANILKQALSKTLVLFNPMAARLRHGEDHRVEIYCDGQGVLFVEAHATVAMDNFIHTFHHRNLIPAVDYCAGIETYPIVVLQVTYFKCGGVSLGVGIQHHVVDGASSLHFINAWSDVARGIDISVPPFIDRTLLRAREPPQPAFPHHEYQLSRPRINTTTTTNTDVVASILKVSGEHVNILKGKYKEDGNTMKYSSYEMLAAHIWRSVCRARGLPDEEETRLYIPIDGRSRLEPALPPGYLGNVIFSTIPTALVGDLLSKPTCYAANKIHNAIMRMDNPYLRSALDYLQLQPDLSALVRGPHTFGTPNVGINSWAKFPIYDADFGWGRPIFMRPGWIAHEGLAIIIPSSENDGTLYLAIALPPHHI 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02880 417 Gene3D - 201 417 IPR023213 -
Viun5g02880 417 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 390 - -
Viun5g02880 417 FunFam Tryptamine hydroxycinnamoyl transferase 204 417 - -
Viun5g02880 417 Pfam Transferase family 2 416 - -
Viun5g02880 417 Gene3D - 1 200 IPR023213 -
Viun5g02880 417 FunFam Spermidine hydroxycinnamoyl transferase 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02880 Viun-Chr5 40222116 40233236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02880 1 417 Monolignol Biosynthesis Gene Families AT5G48930 59.102 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02880 K13065 - gmx:100801923 573.548