Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02873 ATGGCGCAATTACCTCCAAAGATCCCAAACCTCTCACCAAGTTGGCCGGACTTCTCTTCTCAGCACCAGAAGATGCCATTGCCACCTCTTAACAACGACACCACCACCGCCAACACAGGCCATTATCAGCATCATCAAAATCAAAACCCTTCTTGGGTGGACGAGTTCCTCGACTTCTCCTCCGCCCGGCGCGGCGCTCACAGGCGGTCGGTGAGCGACTCCATCACCTACTTGGACGCGCCAATGAGGTGTGGCGAGAACAACAACCACAACAATAATAACGGCAATGGGAATGAGTTTGACAGGTTCGATGATGAACAATTCATGTCCATGTTCACCGATGAAGTAGTGCTCTCTGGGGTCCCCTTGCCACCACCAACTACCTTGTCCTCTTCCAACCCTTCTAGCCCTTCCGATCAGAACTTCTTCCACGATGAGAAAGAGAGCTGCCGGAAGGAGAGGAAGGTGCAGAAGGAGGAAGAGGAGCACCGCCACCAATTCAAAAATGAAGCAGATGAGGTTGAAAGCCAGTGCATGCAGGAAATTGCGCAGCCTCCAAATGACACCAACACTTCTTCTTCCAATGAGAAAATTACTGACCCCAAGAGAGTCAAAAGAATCTTGGCTAATAGACAATCTGCACAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAGAGAAGTGCAACTTCATTACAGGCTGAAATTTCAGTGCTGTCTCCAAGGGTTGCATTTTTGGATCACCAGCGTTTGCTTCTAAATGTGGACAATAGTGCTCTCAAGCAAAGAATCGCAGCCCTTGCTCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTTTATGAGCAACAGAGGCTGAAGAAGATGGAAAATGCAGCAGAGTCACCTCCATTGCCATTGCCATTACCAACAGAAAAGGAAATACAAGTTCTGAACGTTTGA 984 0.4827 MAQLPPKIPNLSPSWPDFSSQHQKMPLPPLNNDTTTANTGHYQHHQNQNPSWVDEFLDFSSARRGAHRRSVSDSITYLDAPMRCGENNNHNNNNGNGNEFDRFDDEQFMSMFTDEVVLSGVPLPPPTTLSSSNPSSPSDQNFFHDEKESCRKERKVQKEEEEHRHQFKNEADEVESQCMQEIAQPPNDTNTSSSNEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSATSLQAEISVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYEQQRLKKMENAAESPPLPLPLPTEKEIQVLNV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02873 327 CDD bZIP_plant_RF2 203 253 IPR044759 GO:0003700|GO:0006355
Viun5g02873 327 FunFam Basic leucine zipper 61 201 274 - -
Viun5g02873 327 SMART brlzneu 198 262 IPR004827 GO:0003700|GO:0006355
Viun5g02873 327 Coils Coil 277 301 - -
Viun5g02873 327 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Viun5g02873 327 PANTHER BASIC LEUCINE ZIPPER 34 1 309 - -
Viun5g02873 327 MobiDBLite consensus disorder prediction 13 48 - -
Viun5g02873 327 MobiDBLite consensus disorder prediction 141 175 - -
Viun5g02873 327 MobiDBLite consensus disorder prediction 1 48 - -
Viun5g02873 327 SUPERFAMILY Leucine zipper domain 202 256 IPR046347 GO:0003700|GO:0006355
Viun5g02873 327 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 252 IPR004827 GO:0003700|GO:0006355
Viun5g02873 327 Coils Coil 157 177 - -
Viun5g02873 327 Pfam Basic region leucine zipper 199 247 IPR004827 GO:0003700|GO:0006355
Viun5g02873 327 Gene3D - 201 273 - -
Viun5g02873 327 MobiDBLite consensus disorder prediction 119 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02873 Viun-Chr5 40197929 40201529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02873 1 279 bZIP Transcription Factor Family AT3G58120 55.049 1.75e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun5g02873 bZIP_2 8.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02873 - - gmx:100815433 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02873 5 40197929 40201529 Viun5g02873 5 40197929 40201529 ECH