Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02865 ATGACGATTAGCGTGAAGGAGTCCATAATGGTGCAACCCGCGGAGGCGACACCGCGGAAGGTGTTGTGGAACTCAGACATAGATTTACTGGTGAGGAATTACCACACTCCCACCGTCTATTTCTACAAACCAAACGGGGCTTCCAATTTCTTCAACGCCAACATTCTGAAACAAGCTCTGAGTAAGACCCTCGTCCTTTTTTACCCAATGGCCGCCCGTCTCCGTCACGGTGAAGACCACCGTGTGGAGATTTATTGTGACGGTCAGGGTGTACTTTTCGTCGAGGCTCATGCCACCGTTGCCATGGACAACTTCATTCACACCTTTCACCATCGCAACCTTATTCTCGCGGTGGATTATTGTGCCGGCATCGAAACATATCCGATAGTGGTATTACAGGTAACATATTTCAAATGTGGAGGGGTGTCGTTAGGAGTCGGTATACAGCACCATGTAGCAGATGGAGCATCGAGTCTTCACTTCATCAATGCATGGTCCGATGTGGCTCGTGGCATTGACATTTCTGTTCCTCCATTTATTGACAGGACCTTACTTCGTGCCAGGGAGCCACCTCAACCTGCTTTTCCTCACCACGAATACCAGCTCTCACGACCCCGCATTAACACCACCACCACCACCAACACAGATGTGGTTGCTTCTATTCTAAAAGTGAGTGGTGAGCAAGTCAACATACTGAAGGGAAAATACAAAGAAGATGGCAACACAATGAAGTATAGCAGTTATGAGATGTTGGCAGCACATATATGGAAATGTGTGTGCAAAGCAAGAGGGCTTTCTGATGAGGAAGAAACGAGACTGTATATTCCAATTGATGGAAGGTCAAGGCTGGAACCTGCTCTTCCTCCTGGTTACCTTGGCAATGTCATCTTCTCCACCATTCCCACAGCACTGGTAGGAGATCTGTTGTCGAAACCTACATGCTATGCTGCAAACAAAATCCATAATGCAATTATGAGAATGGACAACCAATATCTGAGGTCGGCTCTTGACTATCTACAGCTACAGCCTGATCTAAGTGCTCTTGTTCGTGGACCTCATACTTTTGGGACTCCAAATGTTGGTATCAATAGCTGGGCTAAGTTTCCAATCTATGATGCTGACTTTGGTTGGGGGAGACCAATCTTCATGAGACCTGGCTGGATTGCACACGAGGGTCTAACAATCATAACTCCAAGCTCAGCAAATGATGGCACTTTGTATTTGGCAATCGCCCTACCACAACATCATATGAAGTTGTTTCAACAATTCTTTTATGACATATGA 1284 0.4634 MTISVKESIMVQPAEATPRKVLWNSDIDLLVRNYHTPTVYFYKPNGASNFFNANILKQALSKTLVLFYPMAARLRHGEDHRVEIYCDGQGVLFVEAHATVAMDNFIHTFHHRNLILAVDYCAGIETYPIVVLQVTYFKCGGVSLGVGIQHHVADGASSLHFINAWSDVARGIDISVPPFIDRTLLRAREPPQPAFPHHEYQLSRPRINTTTTTNTDVVASILKVSGEQVNILKGKYKEDGNTMKYSSYEMLAAHIWKCVCKARGLSDEEETRLYIPIDGRSRLEPALPPGYLGNVIFSTIPTALVGDLLSKPTCYAANKIHNAIMRMDNQYLRSALDYLQLQPDLSALVRGPHTFGTPNVGINSWAKFPIYDADFGWGRPIFMRPGWIAHEGLTIITPSSANDGTLYLAIALPQHHMKLFQQFFYDI 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02865 427 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 423 - -
Viun5g02865 427 Gene3D - 1 202 IPR023213 -
Viun5g02865 427 FunFam Tryptamine hydroxycinnamoyl transferase 204 425 - -
Viun5g02865 427 Gene3D - 206 427 IPR023213 -
Viun5g02865 427 FunFam Spermidine hydroxycinnamoyl transferase 1 200 - -
Viun5g02865 427 Pfam Transferase family 2 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02865 Viun-Chr5 40126988 40128478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02865 1 427 Monolignol Biosynthesis Gene Families AT5G48930 59.353 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02865 K13065 - gmx:100801923 588.956