Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02843 ATGCGAAGAAGCTGCATCAACCTCTGGATCGTTGTCGCACTCTTCGTCCCTGTTCTCCTCTCTCTCAGAAGCCGTCGAGGCGAAACCCAAACCCAAACCACTCCATCTTCTTCTTCTGCTTCTTTCTCTGATTCTTCTTCCTTCTCGGTCAAGCTTGCCAACACATTCCAATTCAACCAAAGGATCCGAGACGGCTCCAATCTTGAATATGACTTCTACAAGGACACCTGTCCCCAAGCGGAGGGCATTGTCCGTTCAGCGCTCACGCGCATTTACTTCGACCACAGGGACGTTGCTCCTGCCCTGCTTCGTCTCTTCTTCCACGATTGCTTCATCCAGGGATGTGATGCTTCGTTGCTGTTGGATGAGAACGATGGTAATAGTAACAGTTCGGTGGAGAAGCAGGCTGTGCCAAATCAGACACTGAGAGGTTTTGACAAGATTGACTTGATAAAGGAGGAGGTGGAGCAAGCGTGTCCTGGTGTTGTGTCTTGTGCTGATATAGTTTCTCTTGCAGCAAGGGATTCCGTTCTTCTGGCTGGTGGGCCATTCTATCCAGTTTTAACTGGCAGAAGAGACAACCATCAATCGTTTTTTGAGGAAGCAACTGATCAGATTCCCAGGCCTGATGATAATGTTACACGCACATTGCATCTCTTTAATCTCAGAGGATTCAATGCAAGAGAAACTGTCAGCCTTCTTGGAGGACACAACATTGGAAAAATTGGTTGTGATTTCATTCAGCAAAGGTTATACAACTTTCAGGACACAAGACAACCAGATCCTAGTATACCTCCTGATTTCCTTCGTCAGATGAGGCTAAATTGTCCAAACAACTCAAACACCAACAACAATAAAGATGAGTTTATGACTTCAAAGCCTATGAGCAGTGTTTTTCACTCTAAATCAGGGATGTCATACATGCAAGCATTGTCATCTTCAGTGTCATCAGGTTCAACATTTGACACTCATTACTACCAAAGTCTGCTTAGAGGAAGAGGACTACTTTTTGCTGATCAGCAACTGATGGCTGAGGATAAAACTGCCAAATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACCTTTCGCATGGACTTTGCCAGAGTCATGTTGAAAATGTCTAATCTTGATGTTTTGACAGGACTTCAAGGTCAAGTTCGACTCAATTGCTCCAGACCTGTGACTTCTTGA 1194 0.4497 MRRSCINLWIVVALFVPVLLSLRSRRGETQTQTTPSSSSASFSDSSSFSVKLANTFQFNQRIRDGSNLEYDFYKDTCPQAEGIVRSALTRIYFDHRDVAPALLRLFFHDCFIQGCDASLLLDENDGNSNSSVEKQAVPNQTLRGFDKIDLIKEEVEQACPGVVSCADIVSLAARDSVLLAGGPFYPVLTGRRDNHQSFFEEATDQIPRPDDNVTRTLHLFNLRGFNARETVSLLGGHNIGKIGCDFIQQRLYNFQDTRQPDPSIPPDFLRQMRLNCPNNSNTNNNKDEFMTSKPMSSVFHSKSGMSYMQALSSSVSSGSTFDTHYYQSLLRGRGLLFADQQLMAEDKTAKLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGLQGQVRLNCSRPVTS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02843 397 PRINTS Plant peroxidase signature 101 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Plant peroxidase signature 369 382 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Plant peroxidase signature 312 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Plant peroxidase signature 328 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Plant peroxidase signature 143 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Plant peroxidase signature 77 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Plant peroxidase signature 162 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Plant peroxidase signature 228 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Haem peroxidase superfamily signature 99 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Haem peroxidase superfamily signature 314 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Haem peroxidase superfamily signature 163 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Haem peroxidase superfamily signature 181 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 FunFam Peroxidase 71 216 - -
Viun5g02843 397 ProSiteProfiles Plant heme peroxidase family profile. 67 395 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 ProSitePatterns Peroxidases active site signature. 99 110 IPR019794 GO:0004601
Viun5g02843 397 Pfam Peroxidase 84 358 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 CDD secretory_peroxidase 67 393 IPR033905 GO:0004601|GO:0042744
Viun5g02843 397 Gene3D - 71 392 - -
Viun5g02843 397 PANTHER PEROXIDASE 25-RELATED 46 382 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g02843 397 Gene3D Peroxidase, domain 2 207 374 - -
Viun5g02843 397 SUPERFAMILY Heme-dependent peroxidases 68 393 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02843 Viun-Chr5 39976295 39978894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02843 64 393 Peroxidase AT4G33870 45.161 2.84e-97 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02843 K00430 - gmx:100804973 652.899