Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02832 ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTATCGTGGTGGCCTTCAGATTTTGTTGAAAATTTTGGATCTGTTTCTTTGGATTCTAATGATGAGGCACTAAATAATAAAGAATCTCCTGTACATGTTGTCAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGCGCACTGGAATGCTTTCAGAACCCATACCAAATGGTTTTTACTCAGTTGTTCCGGAAACAAGACTAAAGGAACTTTTTGATAATATTCCTTCCTTGGACGAGCTTCATGCTTTGAGTGGAGAGGGTTTTAAGGCTGATGTCATTCTCGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTAAAGCAATTAATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCGGCTGCCATAATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGTCCCAATATTGAAAGTCCAGCAAAAACTGTGCTAGATGAAACCACTCACATGTTAGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTCGGTCTTGAAAGTAGGCTCGTAGTGGGCTTGCCAAATGATGGAGTTACTGAATGTCAAGACTCGTACAAGCATATATCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGTTTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGGTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCGAACAGCCCTTTATTTGGGGTTTCAGAGAGTGTTGAGAAGGAGGAAAGCCTCCAATTCCATAGAAAATTTGAACCATCTTCAAATGCATTGGGCCTTTCCTTGAGAAATGTGATGTTAAGATCAAATAGCAGTTTGAGCTTGTCTCATAGTGAACCCAACGTTGGCACTACATTAGGTCGGCGTAGTCGGAGAAAGATCATTGCTGAACAGAGGACGGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGGGCGATCCATGCTTAGTGGTGATAGGACAGCATTTAGAGATTTTACTGATGATCAGGCTACATCAAGATCTAGCTATAGGTCAGATGGCGCATCCTCCTCGTCAGAAGCCCGTAGGATAAGAAGAAGAAGCGTCAGCATTACACCTGAGATTGGAGATGATATCGTAAGGGCTGTACGGGCTATGAATGAAACTCTGAAGCAAAATCGTCTCTTGAGAGAACGAGGAGATGATAACTCTACGAACAATAACAGTAGTGATGCAAATCTTCAGAAAAATGTGTCAAATTTTCATCTTGATGGTCATGATGCACTATATTCTCTTCAGCATGACCATGGAAACTCACAAAAAGCAATGTCATTACCATCTTCACCTCATGATTATAGAGGTCATTCTTCAGAGAGAAGTGGACCGTCGAGACAAGGAGTGAATGATGAAATGGAGTCAACTTGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTCTGTTACCGTATGAAAAATGGAATATTGACTTCTCTGAATTGACTGTTGGAACTCGGGTAGGGATTGGTTTCTTTGGAGAGGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAATGAGATATCTATTCTGAGCCGACTTCGACATCCTAATGTTATATTGTTTCTCGGTGCATGCACAAAGCCTCCACGGTTGTCAATGGTTACAGAATATATGGAATTGGGATCGTTGTATTACTTGATACATTTAAGTGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTAAGGATGTTACGTGACATATGCAAGGGTTTGATGTGCATACATCGAATGAAGATTGTTCACCGTGATCTGAAAAGCGCAAATTGTCTGGTGAATAAGCATTGGACTGTGAAAATATGTGATTTTGGGCTTTCAAGATTAATGGCAGAGTCTCCTATGAGAGATTCTTCCTCGGCTGGAACTCCAGAATGGATGGCTCCTGAGCTCATTCGAAACGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATCATGTGGGAACTCTGCACCTTGAGCAGACCATGGGAAGGAATACCACCTGAGAGGGTGGTCTACTCCGTTGCACATGAGGCTTCCAGATTGGAAATACCAGAAGGCCCTCTAGGAAGGCTTATTTCAGATTGTTGGGCAGAATCCCATGAGCGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTAGTGGACATCGAGTACTCCTTGTGCTGA 2418 0.4156 MEETREDAGPTEQGPSNVSWWPSDFVENFGSVSLDSNDEALNNKESPVHVVKDVLSSQKASQTLWRTGMLSEPIPNGFYSVVPETRLKELFDNIPSLDELHALSGEGFKADVILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNIESPAKTVLDETTHMLENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVVGLPNDGVTECQDSYKHISLIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSESVEKEESLQFHRKFEPSSNALGLSLRNVMLRSNSSLSLSHSEPNVGTTLGRRSRRKIIAEQRTASSSPEHPSFRARGRSMLSGDRTAFRDFTDDQATSRSSYRSDGASSSSEARRIRRRSVSITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSTNNNSSDANLQKNVSNFHLDGHDALYSLQHDHGNSQKAMSLPSSPHDYRGHSSERSGPSRQGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLIHLSGQKKKLNWRRRLRMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRLMAESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGIPPERVVYSVAHEASRLEIPEGPLGRLISDCWAESHERPSCEEILSRLVDIEYSLC 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02832 805 ProSiteProfiles Protein kinase domain profile. 549 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02832 805 MobiDBLite consensus disorder prediction 1 20 - -
Viun5g02832 805 ProSitePatterns Protein kinases ATP-binding region signature. 555 576 IPR017441 GO:0005524
Viun5g02832 805 MobiDBLite consensus disorder prediction 439 461 - -
Viun5g02832 805 FunFam Serine/threonine-protein kinase isoform 1 539 627 - -
Viun5g02832 805 SMART serkin_6 549 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02832 805 SUPERFAMILY Protein kinase-like (PK-like) 522 797 IPR011009 -
Viun5g02832 805 Gene3D Transferase(Phosphotransferase) domain 1 628 803 - -
Viun5g02832 805 Pfam Protein tyrosine and serine/threonine kinase 550 797 IPR001245 GO:0004672|GO:0006468
Viun5g02832 805 MobiDBLite consensus disorder prediction 388 404 - -
Viun5g02832 805 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 332 797 - -
Viun5g02832 805 MobiDBLite consensus disorder prediction 484 517 - -
Viun5g02832 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Viun5g02832 805 Gene3D Phosphorylase Kinase; domain 1 542 627 - -
Viun5g02832 805 MobiDBLite consensus disorder prediction 271 291 - -
Viun5g02832 805 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
Viun5g02832 805 CDD STKc_MAP3K-like 555 797 - -
Viun5g02832 805 MobiDBLite consensus disorder prediction 354 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02832 Viun-Chr5 39814291 39839080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02832 1 805 MAP Kinase Kinase Kinase AT3G58640 70.073 0.0 1169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Viun5g02832 PK_Tyr_Ser-Thr 1.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02832 - - gmx:100803469 1423.3