Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02831 ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTATCGTGGTGGCCTTCAGATTTTGTTGAAAATTTTGGATCTGTTTCTTTGGATTCTAATGATGAGGCACTAAATAATAAAGAATCTCCTGTACATGTTGTCAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGCGCACTGGAATGCTTTCAGAACCCATACCAAATGGTTTTTACTCAGTTGTTCCGGAAACAAGACTAAAGGAACTTTTTGATAATATTCCTTCCTTGGACGAGCTTCATGCTTTGAGTGGAGAGGGTTTTAAGGCTGATGTCATTCTCGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTAAAGCAATTAATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCGGCTGCCATAATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGTCCCAATATTGAAAGTCCAGCAAAAACTGTGCTAGATGAAACCACTCACATGTTAGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTCGGTCTTGAAAGTAGGCTCGTAGTGGGCTTGCCAAATGATGGAGTTACTGAATGTCAAGACTCGTACAAGCATATATCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGTTTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGGTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCGAACAGCCCTTTATTTGGGGTTTCAGAGAGTCCAGAACATCCCTCATTTCGAGCACGTGGGCGATCCATGCTTAGTGGTGATAGGACAGCATTTAGAGATTTTACTGATGATCAGGCTACATCAAGATCTAGCTATAGGTCAGATGGCGCATCCTCCTCGTCAGAAGCCCGTAGGATAAGAAGAAGAAGCGTCAGCATTACACCTGAGATTGGAGATGATATCGTAAGGGCTGTACGGGCTATGAATGAAACTCTGAAGCAAAATCGTCTCTTGAGAGAACGAGGAGATGATAACTCTACGAACAATAACAGTAGTGATGCAAATCTTCAGAAAAATGTGTCAAATTTTCATCTTGATGGTCATGATGCACTATATTCTCTTCAGCATGACCATGGAAACTCACAAAAAGCAATGTCATTACCATCTTCACCTCATGATTATAGAGGTCATTCTTCAGAGAGAAGTGGACCGTCGAGACAAGGAGTGAATGATGAAATGGAGTCAACTTGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTCTGTTACCGTATGAAAAATGGAATATTGACTTCTCTGAATTGACTGTTGGAACTCGGGTAGGGATTGGTTTCTTTGGAGAGGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAATGAGATATCTATTCTGAGCCGACTTCGACATCCTAATGTTATATTGTTTCTCGGTGCATGCACAAAGCCTCCACGGTTGTCAATGGTTACAGAATATATGGAATTGGGATCGTTGTATTACTTGATACATTTAAGTGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTAAGGATGTTACGTGACATATGCAAGGGTTTGATGTGCATACATCGAATGAAGATTGTTCACCGTGATCTGAAAAGCGCAAATTGTCTGGTGAATAAGCATTGGACTGTGAAAATATGTGATTTTGGGCTTTCAAGATTAATGGCAGAGTCTCCTATGAGAGATTCTTCCTCGGCTGGAACTCCAGAATGGATGGCTCCTGAGCTCATTCGAAACGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATCATGTGGGAACTCTGCACCTTGAGCAGACCATGGGAAGGAATACCACCTGAGAGGGTGGTCTACTCCGTTGCACATGAGGCTTCCAGATTGGAAATACCAGAAGGCCCTCTAGGAAGGCTTATTTCAGATTGTTGGGCAGAATCCCATGAGCGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTAGTGGACATCGAGTACTCCTTGTGCTGA 2220 0.4144 MEETREDAGPTEQGPSNVSWWPSDFVENFGSVSLDSNDEALNNKESPVHVVKDVLSSQKASQTLWRTGMLSEPIPNGFYSVVPETRLKELFDNIPSLDELHALSGEGFKADVILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNIESPAKTVLDETTHMLENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVVGLPNDGVTECQDSYKHISLIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSESPEHPSFRARGRSMLSGDRTAFRDFTDDQATSRSSYRSDGASSSSEARRIRRRSVSITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSTNNNSSDANLQKNVSNFHLDGHDALYSLQHDHGNSQKAMSLPSSPHDYRGHSSERSGPSRQGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLIHLSGQKKKLNWRRRLRMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRLMAESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGIPPERVVYSVAHEASRLEIPEGPLGRLISDCWAESHERPSCEEILSRLVDIEYSLC 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02831 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Viun5g02831 739 MobiDBLite consensus disorder prediction 1 20 - -
Viun5g02831 739 MobiDBLite consensus disorder prediction 270 284 - -
Viun5g02831 739 Gene3D Phosphorylase Kinase; domain 1 476 561 - -
Viun5g02831 739 Pfam Protein tyrosine and serine/threonine kinase 484 731 IPR001245 GO:0004672|GO:0006468
Viun5g02831 739 MobiDBLite consensus disorder prediction 322 338 - -
Viun5g02831 739 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
Viun5g02831 739 MobiDBLite consensus disorder prediction 373 395 - -
Viun5g02831 739 CDD STKc_MAP3K-like 489 731 - -
Viun5g02831 739 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 278 731 - -
Viun5g02831 739 SMART serkin_6 483 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02831 739 ProSitePatterns Protein kinases ATP-binding region signature. 489 510 IPR017441 GO:0005524
Viun5g02831 739 FunFam Serine/threonine-protein kinase isoform 1 473 561 - -
Viun5g02831 739 MobiDBLite consensus disorder prediction 418 451 - -
Viun5g02831 739 SUPERFAMILY Protein kinase-like (PK-like) 456 731 IPR011009 -
Viun5g02831 739 MobiDBLite consensus disorder prediction 270 346 - -
Viun5g02831 739 ProSiteProfiles Protein kinase domain profile. 483 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02831 739 Gene3D Transferase(Phosphotransferase) domain 1 562 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02831 Viun-Chr5 39814290 39839080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02831 1 739 MAP Kinase Kinase Kinase AT3G58640 61.661 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Viun5g02831 PK_Tyr_Ser-Thr 1.4e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02831 - - gmx:100810612 1338.17