Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02827 ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTATCGTGGTGGCCTTCAGATTTTGTTGAAAATTTTGGATCTGTTTCTTTGGATTCTAATGATGAGGCACTAAATAATAAAGAATCTCCTGTACATGTTGTCAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGCGCACTGGAATGCTTTCAGAACCCATACCAAATGGTTTTTACTCAGTTGTTCCGGAAACAAGACTAAAGGAACTTTTTGATAATATTCCTTCCTTGGACGAGCTTCATGCTTTGAGTGGAGAGGGTTTTAAGGCTGATGTCATTCTCGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTAAAGCAATTAATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCGGCTGCCATAATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGTCCCAATATTGAAAGTCCAGCAAAAACTGTGCTAGATGAAACCACTCACATGTTAGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTCGGTCTTGAAAGTAGGCTCGTAGTGGGCTTGCCAAATGATGGAGTTACTGAATGTCAAGACTCGTACAAGCATATATCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGTTTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGGTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCGAACAGCCCTTTATTTGGGGTTTCAGAGAGTGTTGAGAAGGAGGAAAGCCTCCAATTCCATAGAAAATTTGAACCATCTTCAAATGCATTGGGCCTTTCCTTGAGAAATGTGATGTTAAGATCAAATAGCAGTTTGAGCTTGTCTCATAGTGAACCCAACGTTGGCACTACATTAGGTCGGCGTAGTCGGAGAAAGATCATTGCTGAACAGAGGACGGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGGGCGATCCATGCTTAGTGGTGATAGGACAGCATTTAGAGATTTTACTGATGATCAGGCTACATCAAGATCTAGCTATAGGTCAGATGGCGCATCCTCCTCGTCAGAAGCCCGTAGGATAAGAAGAAGAAGCGTCAGCATTACACCTGAGATTGGAGATGATATCGTAAGGGCTGTACGGGCTATGAATGAAACTCTGAAGCAAAATCGTCTCTTGAGAGAACGAGGAGATGATAACTCTACGAACAATAACAGTAGTGATGCAAATCTTCAGAAAAATCATGACCATGGAAACTCACAAAAAGCAATGTCATTACCATCTTCACCTCATGATTATAGAGGTCATTCTTCAGAGAGAAGTGGACCGTCGAGACAAGGAGTGAATGATGAAATGGAGTCAACTTGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTCTGTTACCGTATGAAAAATGGAATATTGACTTCTCTGAATTGACTGTTGGAACTCGGGTAGGGATTGGTTTCTTTGGAGAGGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAATGAGATATCTATTCTGAGCCGACTTCGACATCCTAATGTTATATTGTTTCTCGGTGCATGCACAAAGCCTCCACGGTTGTCAATGGTTACAGAATATATGGAATTGGGATCGTTGTATTACTTGATACATTTAAGTGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTAAGGATGTTACGTGACATATGCAAGGGTTTGATGTGCATACATCGAATGAAGATTGTTCACCGTGATCTGAAAAGCGCAAATTGTCTGGTGAATAAGCATTGGACTGTGAAAATATGTGATTTTGGGCTTTCAAGATTAATGGCAGAGTCTCCTATGAGAGATTCTTCCTCGGCTGGAACTCCAGAATGGATGGCTCCTGAGCTCATTCGAAACGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATCATGTGGGAACTCTGCACCTTGAGCAGACCATGGGAAGGAATACCACCTGAGAGGGTGGTCTACTCCGTTGCACATGAGGCTTCCAGATTGGAAATACCAGAAGGCCCTCTAGGAAGGCTTATTTCAGATTGTTGGGCAGAATCCCATGAGCGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTAGTGGACATCGAGTACTCCTTGTGCTGA 2370 0.4169 MEETREDAGPTEQGPSNVSWWPSDFVENFGSVSLDSNDEALNNKESPVHVVKDVLSSQKASQTLWRTGMLSEPIPNGFYSVVPETRLKELFDNIPSLDELHALSGEGFKADVILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNIESPAKTVLDETTHMLENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVVGLPNDGVTECQDSYKHISLIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSESVEKEESLQFHRKFEPSSNALGLSLRNVMLRSNSSLSLSHSEPNVGTTLGRRSRRKIIAEQRTASSSPEHPSFRARGRSMLSGDRTAFRDFTDDQATSRSSYRSDGASSSSEARRIRRRSVSITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSTNNNSSDANLQKNHDHGNSQKAMSLPSSPHDYRGHSSERSGPSRQGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLIHLSGQKKKLNWRRRLRMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRLMAESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGIPPERVVYSVAHEASRLEIPEGPLGRLISDCWAESHERPSCEEILSRLVDIEYSLC 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02827 789 MobiDBLite consensus disorder prediction 1 20 - -
Viun5g02827 789 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 329 781 - -
Viun5g02827 789 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
Viun5g02827 789 SMART serkin_6 533 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02827 789 MobiDBLite consensus disorder prediction 438 501 - -
Viun5g02827 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Viun5g02827 789 FunFam Serine/threonine-protein kinase isoform 1 523 611 - -
Viun5g02827 789 MobiDBLite consensus disorder prediction 388 404 - -
Viun5g02827 789 SUPERFAMILY Protein kinase-like (PK-like) 506 781 IPR011009 -
Viun5g02827 789 Pfam Protein tyrosine and serine/threonine kinase 534 781 IPR001245 GO:0004672|GO:0006468
Viun5g02827 789 Gene3D Phosphorylase Kinase; domain 1 526 611 - -
Viun5g02827 789 MobiDBLite consensus disorder prediction 449 477 - -
Viun5g02827 789 ProSitePatterns Protein kinases ATP-binding region signature. 539 560 IPR017441 GO:0005524
Viun5g02827 789 ProSiteProfiles Protein kinase domain profile. 533 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02827 789 MobiDBLite consensus disorder prediction 271 291 - -
Viun5g02827 789 Gene3D Transferase(Phosphotransferase) domain 1 612 787 - -
Viun5g02827 789 CDD STKc_MAP3K-like 539 781 - -
Viun5g02827 789 MobiDBLite consensus disorder prediction 354 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02827 Viun-Chr5 39814289 39839080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02827 1 789 MAP Kinase Kinase Kinase AT3G58640 69.465 0.0 1146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Viun5g02827 PK_Tyr_Ser-Thr 1.6e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02827 - - gmx:100803469 1385.55