Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02826 ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTATCGTGGTGGCCTTCAGATTTTGTTGAAAATTTTGGATCTGTTTCTTTGGATTCTAATGATGAGGCACTAAATAATAAAGAATCTCCTGTACATGTTGTCAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGCGCACTGGAATGCTTTCAGAACCCATACCAAATGGTTTTTACTCAGTTGTTCCGGAAACAAGACTAAAGGAACTTTTTGATAATATTCCTTCCTTGGACGAGCTTCATGCTTTGAGTGGAGAGGGTTTTAAGGCTGATGTCATTCTCGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTAAAGCAATTAATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCGGCTGCCATAATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGTCCCAATATTGAAAGTCCAGCAAAAACTGTGCTAGATGAAACCACTCACATGTTAGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTCGGTCTTGAAAGTAGGCTCGTAGTGGGCTTGCCAAATGATGGAGTTACTGAATGTCAAGACTCGTACAAGCATATATCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGTTTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGGTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCGAACAGCCCTTTATTTGGGGTTTCAGAGAGTGTTGAGAAGGAGGAAAGCCTCCAATTCCATAGAAAATTTGAACCATCTTCAAATGCATTGGGCCTTTCCTTGAGAAATGTGATGTTAAGATCAAATAGCAGTTTGAGCTTGTCTCATAGTGAACCCAACGTTGGCACTACATTAGGTCGGCGTAGTCGGAGAAAGATCATTGCTGAACAGAGGACGGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGGGCGATCCATGCTTAGTGGTGATAGGACAGCATTTAGAGATTTTACTGATGATCAGGCTACATCAAGGTTCTCATCATTTATATCTGCTTTTTCACTGTTATGTCTATGGCCCCTCTTGTTTTTATCTAGCTATAGGTCAGATGGCGCATCCTCCTCGTCAGAAGCCCGTAGGATAAGAAGAAGAAGCGTCAGCATTACACCTGAGATTGGAGATGATATCGTAAGGGCTGTACGGGCTATGAATGAAACTCTGAAGCAAAATCGTCTCTTGAGAGAACGAGGAGATGATAACTCTACGAACAATAACAGTAGTGATGCAAATCTTCAGAAAAATGTGTCAAATTTTCATCTTGATGGTCATGATGCACTATATTCTCTTCAGCATGACCATGGAAACTCACAAAAAGCAATGTCATTACCATCTTCACCTCATGATTATAGAGGTCATTCTTCAGAGAGAAGTGGACCGTCGAGACAAGGAGTGAATGATGAAATGGAGTCAACTTGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTCTGTTACCGTATGAAAAATGGAATATTGACTTCTCTGAATTGACTGTTGGAACTCGGGTAGGGATTGGTTTCTTTGGAGAGGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAATGAGATATCTATTCTGAGCCGACTTCGACATCCTAATGTTATATTGTTTCTCGGTGCATGCACAAAGCCTCCACGGTTGTCAATGGTTACAGAATATATGGAATTGGGATCGTTGTATTACTTGATACATTTAAGTGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTAAGGATGTTACGTGACATATGCAAGGGTTTGATGTGCATACATCGAATGAAGATTGTTCACCGTGATCTGAAAAGCGCAAATTGTCTGGTGAATAAGCATTGGACTGTGAAAATATGTGATTTTGGGCTTTCAAGATTAATGGCAGAGTCTCCTATGAGAGATTCTTCCTCGGCTGGAACTCCAGAATGGATGGCTCCTGAGCTCATTCGAAACGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATCATGTGGGAACTCTGCACCTTGAGCAGACCATGGGAAGGAATACCACCTGAGAGGGTGGTCTACTCCGTTGCACATGAGGCTTCCAGATTGGAAATACCAGAAGGCCCTCTAGGAAGGCTTATTTCAGATTGTTGGGCAGAATCCCATGAGCGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTAGTGGACATCGAGTACTCCTTGTGCTGA 2475 0.4141 MEETREDAGPTEQGPSNVSWWPSDFVENFGSVSLDSNDEALNNKESPVHVVKDVLSSQKASQTLWRTGMLSEPIPNGFYSVVPETRLKELFDNIPSLDELHALSGEGFKADVILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNIESPAKTVLDETTHMLENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVVGLPNDGVTECQDSYKHISLIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSESVEKEESLQFHRKFEPSSNALGLSLRNVMLRSNSSLSLSHSEPNVGTTLGRRSRRKIIAEQRTASSSPEHPSFRARGRSMLSGDRTAFRDFTDDQATSRFSSFISAFSLLCLWPLLFLSSYRSDGASSSSEARRIRRRSVSITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSTNNNSSDANLQKNVSNFHLDGHDALYSLQHDHGNSQKAMSLPSSPHDYRGHSSERSGPSRQGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLIHLSGQKKKLNWRRRLRMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRLMAESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGIPPERVVYSVAHEASRLEIPEGPLGRLISDCWAESHERPSCEEILSRLVDIEYSLC 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02826 824 SMART serkin_6 568 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02826 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Viun5g02826 824 MobiDBLite consensus disorder prediction 1 20 - -
Viun5g02826 824 MobiDBLite consensus disorder prediction 458 480 - -
Viun5g02826 824 MobiDBLite consensus disorder prediction 503 536 - -
Viun5g02826 824 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 359 816 - -
Viun5g02826 824 ProSitePatterns Protein kinases ATP-binding region signature. 574 595 IPR017441 GO:0005524
Viun5g02826 824 Pfam Protein tyrosine and serine/threonine kinase 569 816 IPR001245 GO:0004672|GO:0006468
Viun5g02826 824 ProSiteProfiles Protein kinase domain profile. 568 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02826 824 MobiDBLite consensus disorder prediction 354 374 - -
Viun5g02826 824 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
Viun5g02826 824 CDD STKc_MAP3K-like 574 816 - -
Viun5g02826 824 Gene3D Phosphorylase Kinase; domain 1 561 646 - -
Viun5g02826 824 MobiDBLite consensus disorder prediction 271 291 - -
Viun5g02826 824 SUPERFAMILY Protein kinase-like (PK-like) 541 816 IPR011009 -
Viun5g02826 824 FunFam Serine/threonine-protein kinase isoform 1 558 646 - -
Viun5g02826 824 Gene3D Transferase(Phosphotransferase) domain 1 647 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02826 Viun-Chr5 39814289 39839080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02826 1 824 MAP Kinase Kinase Kinase AT3G58640 68.252 0.0 1161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Viun5g02826 PK_Tyr_Ser-Thr 1.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02826 - - gmx:100803469 1417.52