Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02825 ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTATCGTGGTGGCCTTCAGATTTTGTTGAAAATTTTGGATCTGTTTCTTTGGATTCTAATGATGAGGCACTAAATAATAAAGAATCTCCTGTACATGTTGTCAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGCGCACTGGAATGCTTTCAGAACCCATACCAAATGGTTTTTACTCAGTTGTTCCGGAAACAAGACTAAAGGAACTTTTTGATAATATTCCTTCCTTGGACGAGCTTCATGCTTTGAGTGGAGAGGGTTTTAAGGCTGATGTCATTCTCGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTAAAGCAATTAATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCGGCTGCCATAATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGTCCCAATATTGAAAGTCCAGCAAAAACTGTGCTAGATGAAACCACTCACATGTTAGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCATGGTTCTTGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTCGGTCTTGAAAGTAGGCTCGTAGTGGGCTTGCCAAATGATGGAGTTACTGAATGTCAAGACTCGTACAAGCATATATCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGTTTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGGTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCGAACAGCCCTTTATTTGGGGTTTCAGAGAGTGTTGAGAAGGAGGAAAGCCTCCAATTCCATAGAAAATTTGAACCATCTTCAAATGCATTGGGCCTTTCCTTGAGAAATGTGATGTTAAGATCAAATAGCAGTTTGAGCTTGTCTCATAGTGAACCCAACGTTGGCACTACATTAGGTCGGCGTAGTCGGAGAAAGATCATTGCTGAACAGAGGACGGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGGGCGATCCATGCTTAGTGGTGATAGGACAGCATTTAGAGATTTTACTGATGATCAGGCTACATCAAGGTTCTCATCATTTATATCTGCTTTTTCACTGTTATGTCTATGGCCCCTCTTGTTTTTATCTAGCTATAGGTCAGATGGCGCATCCTCCTCGTCAGAAGCCCGTAGGATAAGAAGAAGAAGCGTCAGCATTACACCTGAGATTGGAGATGATATCGTAAGGGCTGTACGGGCTATGAATGAAACTCTGAAGCAAAATCGTCTCTTGAGAGAACGAGGAGATGATAACTCTACGAACAATAACAGTAGTGATGCAAATCTTCAGAAAAATCATGACCATGGAAACTCACAAAAAGCAATGTCATTACCATCTTCACCTCATGATTATAGAGGTCATTCTTCAGAGAGAAGTGGACCGTCGAGACAAGGAGTGAATGATGAAATGGAGTCAACTTGGAATAAAGTACTGGAATCTCCAATGTTCAATAATAAACCTCTGTTACCGTATGAAAAATGGAATATTGACTTCTCTGAATTGACTGTTGGAACTCGGGTAGGGATTGGTTTCTTTGGAGAGGTTTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTTCTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTTTGCAATGAGATATCTATTCTGAGCCGACTTCGACATCCTAATGTTATATTGTTTCTCGGTGCATGCACAAAGCCTCCACGGTTGTCAATGGTTACAGAATATATGGAATTGGGATCGTTGTATTACTTGATACATTTAAGTGGTCAAAAGAAAAAGCTTAATTGGCGGAGAAGACTAAGGATGTTACGTGACATATGCAAGGGTTTGATGTGCATACATCGAATGAAGATTGTTCACCGTGATCTGAAAAGCGCAAATTGTCTGGTGAATAAGCATTGGACTGTGAAAATATGTGATTTTGGGCTTTCAAGATTAATGGCAGAGTCTCCTATGAGAGATTCTTCCTCGGCTGGAACTCCAGAATGGATGGCTCCTGAGCTCATTCGAAACGAACCATTCACAGAAAAATGTGATATCTTTAGCCTTGGGGTGATCATGTGGGAACTCTGCACCTTGAGCAGACCATGGGAAGGAATACCACCTGAGAGGGTGGTCTACTCCGTTGCACATGAGGCTTCCAGATTGGAAATACCAGAAGGCCCTCTAGGAAGGCTTATTTCAGATTGTTGGGCAGAATCCCATGAGCGGCCAAGTTGTGAGGAGATTCTTTCTCGTTTAGTGGACATCGAGTACTCCTTGTGCTGA 2427 0.4153 MEETREDAGPTEQGPSNVSWWPSDFVENFGSVSLDSNDEALNNKESPVHVVKDVLSSQKASQTLWRTGMLSEPIPNGFYSVVPETRLKELFDNIPSLDELHALSGEGFKADVILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNIESPAKTVLDETTHMLENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVVGLPNDGVTECQDSYKHISLIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSESVEKEESLQFHRKFEPSSNALGLSLRNVMLRSNSSLSLSHSEPNVGTTLGRRSRRKIIAEQRTASSSPEHPSFRARGRSMLSGDRTAFRDFTDDQATSRFSSFISAFSLLCLWPLLFLSSYRSDGASSSSEARRIRRRSVSITPEIGDDIVRAVRAMNETLKQNRLLRERGDDNSTNNNSSDANLQKNHDHGNSQKAMSLPSSPHDYRGHSSERSGPSRQGVNDEMESTWNKVLESPMFNNKPLLPYEKWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMELGSLYYLIHLSGQKKKLNWRRRLRMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRLMAESPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLSRPWEGIPPERVVYSVAHEASRLEIPEGPLGRLISDCWAESHERPSCEEILSRLVDIEYSLC 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02825 808 MobiDBLite consensus disorder prediction 1 20 - -
Viun5g02825 808 ProSitePatterns Protein kinases ATP-binding region signature. 558 579 IPR017441 GO:0005524
Viun5g02825 808 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 335 800 - -
Viun5g02825 808 MobiDBLite consensus disorder prediction 457 520 - -
Viun5g02825 808 Pfam Ethylene-responsive protein kinase Le-CTR1 57 253 - -
Viun5g02825 808 ProSiteProfiles Protein kinase domain profile. 552 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02825 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 671 683 IPR008271 GO:0004672|GO:0006468
Viun5g02825 808 MobiDBLite consensus disorder prediction 354 374 - -
Viun5g02825 808 SUPERFAMILY Protein kinase-like (PK-like) 525 800 IPR011009 -
Viun5g02825 808 Gene3D Phosphorylase Kinase; domain 1 545 630 - -
Viun5g02825 808 Gene3D Transferase(Phosphotransferase) domain 1 631 806 - -
Viun5g02825 808 MobiDBLite consensus disorder prediction 468 496 - -
Viun5g02825 808 CDD STKc_MAP3K-like 558 800 - -
Viun5g02825 808 SMART serkin_6 552 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02825 808 FunFam Serine/threonine-protein kinase isoform 1 542 630 - -
Viun5g02825 808 MobiDBLite consensus disorder prediction 271 291 - -
Viun5g02825 808 Pfam Protein tyrosine and serine/threonine kinase 553 800 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02825 Viun-Chr5 39814288 39839080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02825 1 808 MAP Kinase Kinase Kinase AT3G58640 67.658 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Viun5g02825 PK_Tyr_Ser-Thr 1.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02825 - - gmx:100803469 1379.77