Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02807 ATGTATCACCGTAGATTCAACAAACCAATACGTGTGGCTAACCCAGATGAGCCCGAGCCCGAGCCCGAGCGCGAACCCACATCAGAACCTGGGCCTGCTTCTCCTTCTTCCTGCGATGACACTAAAACAGAAGCACCGTCACCTAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACGATACCGATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAGACGTATCCACCGTCCGATTCGTGGGCCTGGAGAAAGTACGGCCAAAAGCCCATCAAAGGCTCCCCTTACCCAAGGGGATATTACCGATGCAGCAGTTCAAAGGGGTGTCCCGCAAGGAAGCAAGTGGAGCGAAGCCGTGTGGATCCCACAAAGCTCATAGTCACCTACGCCAACGACCACAACCACTCCGTCCCCCTCCCAAAATCCAATTCTTCCGCCGTTTCTGCCGCCGCCTCGCCGGCCGAGTCCGCCACCAGGTTCCCGCTGGAGGAGGAGATGGCCGTGTTCTCAACTCACTCCGATTTTGAACTCGCCGGCGACGCGGCGGTTCTGCTCAGCCAGTACCACTTTCGGTGGTTCGATGACGTGGCGTCCACCGGCGTCCTCGAGAGCCCGATATGCGGCGAGGTGGATGACGTGGCAATGCCAATGAGGGAGGAGGACGAGTCGCTCTTCGCCGATCTCGACGAATTGCCGGAGTGCTCGGTGGTTTTCCGGCGGGGGAATATTCCGAGGAGCAGCGCGATCCGGTGCGGCGGCATCACAGGATAA 774 0.584 MYHRRFNKPIRVANPDEPEPEPEREPTSEPGPASPSSCDDTKTEAPSPKKRREMKKRVVTIPIGDVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYANDHNHSVPLPKSNSSAVSAAASPAESATRFPLEEEMAVFSTHSDFELAGDAAVLLSQYHFRWFDDVASTGVLESPICGEVDDVAMPMREEDESLFADLDELPECSVVFRRGNIPRSSAIRCGGITG 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02807 257 Pfam WRKY DNA -binding domain 80 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun5g02807 257 MobiDBLite consensus disorder prediction 1 79 - -
Viun5g02807 257 SMART WRKY_cls 78 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun5g02807 257 SUPERFAMILY WRKY DNA-binding domain 74 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun5g02807 257 Gene3D WRKY domain 66 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun5g02807 257 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 19 237 IPR044810 GO:0003700
Viun5g02807 257 FunFam WRKY transcription factor 65 65 139 - -
Viun5g02807 257 MobiDBLite consensus disorder prediction 9 26 - -
Viun5g02807 257 ProSiteProfiles WRKY domain profile. 79 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02807 Viun-Chr5 39632451 39634864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02807 23 244 WRKY Transcription Factor Family AT3G58710 51.250 7.02e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun5g02807 WRKY 8.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02807 - - vra:106778551 484.952