Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02796 ATGGTGAAAACTAAATCAGGGCTTCAATGGTTTTGGCCCTGCTTCGGTGGTCGATCATCATCCTCTATCGTCCATTCACAGGGACCTACTTCTTCTTCTTCATACCAAAACCAAGACTACAGATATGATGTGTTTATCAGTTTCAGAGGCCCTGACACCCGCAATTCTTTCGTTGACCATCTATGCTCTCATCTCCTTCAAAAGGGCCTTTTTGTATTGAAGGATGATCACAAACTACAGAAAGGAGAATCCATTTCCCGCCAGCTTCTACAAGCAATTCAACAGTCACGCCTTTCTATCATTGTCTTTTCCAAAAATTATGCTTCCTCAACTTGGTGTTTAGACGAAATGGCCGCTATAGCTTCTTGCAAACAACGATCAAACCACATTGTTTTCCCCATTTTCTATGATGTAGATCCATCTCATGTAAGACATCAGAATGGGGTATACAAGAATGATTTCCTTTCACACAGATGGAAATTCGGAAAAGATCGGGACAAGGTTCCTGGATGGAAGAGGGCTATGACGGATTTTGCAAATTCAGCTGGTTGCGATATCAGGGACAAGCCAGAGTTTGAACAGATTCAAATTATTGTTCAAACAGTAATTAAAAAATTAGGTCATAAGTTTTCATGGTCTGTCAATGACCTTATTGGGATACAACCACGCGTACAAGCATTGGAAGATAAATTAAGATTAGGCTCAAACAGTGATGATGTTCAAGTTTTAGGAATTTGGGGAATGAATGGAATAGGAAAGACTACTCATGCAGCTGTCCTATATGACAAAATCTCTCATAGGTTTGATGCTTCTTGTTTCATTGAGGATGTGAGCAAACTTTATAGGGAAGGTGGCCATTCTGCTGTTCAAAAAGAAATTATTTATCAAACTTTACGTGAAAACATAGATATGAGTAATCCTATTGAAATATCAAGGATTGTAAACAATAGGCTACACAGCATAAAGGTCCTCATAGTTCTGGACAATGTTGATGAATTGGAGCAATTGGAAAATTTGGCTATAAAACCAAAATTGCTTTTGAAGGGAAGTAGACTAGTTATTACAACCACAGATGAGCATATTCTGAAAGTGTGTGAGGGTGAGTGTTTACACAAAGTTCCGTTATTGAATGATAAGGATGCTCGTGAATTGTTCTGTAGAAAGGCTTTCAAAAGTGAAGAGCAAAACAGTAATTGTGCCGCGTTAATTCCTGAAGTACTCAATTATGCCCAAAGTCTCCCATTGGCAATTAGAGTGTTGGGTTCTTTCTTGTGTACTCGAGATGCTGTTGAATGGAGAGATGTGTTGAATAGATTGAAGAATAGTCCAGATAATAAAATTATGAGTGTACTACAAATAACTGTTGATGGACTACACCATGAAGAAAAACAGATATTTTTACACATTGCATGTTTCTTTAAAGGGGAGAGGGAGGATTATGTTAAGCGAATTCTAGACTGTTGTGAGTTATACCCTCACATTGGAATTTCAAGACTCATTCAGAAATCACTCATCACCATTAGCAATGAAGAACTTCAGATGCATGAATTGTTACAAGAATTAGGAAAGAAAATGGTTCGAGACCAATCTCCCGAGGAGCCAGGATTATGGAGTAGAATATGGCTTCATAAAGACTTCTTTCAAGTCTTGATGACAGAAACGGGAACAGAGAAGGTGAAAGCCATAGTTTTAAATAAAAAAGAAGAAATGGCAGAATGTAGTGTTGGTGGATTGTCAAGAATGAAGGACCTTACATTACTCATATTATATCACACAAGAGTTTCAGGAAGACCGGAGTTTCTTTCAGACAGATTGCGTTATGTTTTGTGGCATGATTATCCATTTGCTTCTCTGCCTCCGTACTTTATAGCCTCTAATCTAGTAGATTTGAATATGCCTAACAGTCACATCACACATTTATGGGAAGGCCGCAAGAGTTGTCCTAATTTGAAAAGGATGGATTTAAGCAACTCCAGGTACCTGATTAAGACTCCCGATTTTTCTAGAATCACAAAACTTGAAAGATTAGATCTTTCTGGATGTACAAGTTTATCAGAGATCCATTCATCAATCGGACTTCTTAAGAAGATTGCTTTCTTGAATTTACGAAATTGCTGCAATCTAGTTATCATTGACTTTGGCCTTGTGGGTAATATGAGTTCTCTAAGAGTTCTTCATCTCTCGGGTTGTTCTAAGCTTGAAAGCACCCCAGATTTTACAAGGGCAACACATCTTGAGTACATTGACATGGATGAATGTTCAAGCTTATCCACTATTCATCAATCTATTGGAGTCCTTTCAAGTCTTACATTCTTGAGTTTGAGAAAATGCAGAAAGCTTGTGAGTATACCAAATGATATAAATTCCTTGTTATCTCTACAAACTCTAGATTTATGTAGTTGTTCGAACCTTACCGATCCTACCAAGACAAGCTTCTTCATCTCATTTGAAATCCTTGACTTAAGTTTTTGCAATTTACAAGAAGTAAATGAAGCTATTAGAGAGTTAAGATGTCTGGAAAGACTGAATCTACAGGGAAACAATTTTGTTTCAGTACCTGATTTCTTCAGCGGGCTTCCTCGTCTAGCATATTTAAACTTGTCTTATTGTCATAAACTTAAATCTTTGCTTAGGATTTGCTTTAAAGGAGATGGATCAGGAGGGAAGTATTTTAAAACAGTATCTGGATCTCGTGATCATAGATCAGGCTTTTATCTTTTTGATTGTCCCAATGTGGCTCTAGAGAAGGAGAATCTTGAGATTTTCAAACTTGAATGGTCTCTCCAACTAATGAAGGAACCCTGTAATTTTCGGTGTGGCTTTGACGTTGTTGTTCCTTGGAATTTGATTTCCACCTTTATTCAGTGAAACATTAAGGGGGATTCAATTATAAGAATACTTCAATGTGGCACCAATGACAACTGGATTGGGTTTGCTTTTTGTGTTGTATTTGAGGGAAACAATGGTGATGCGGCTGTTCGATCTTCGCCACACTCTTCATTTTCACATCCACTTTATCTTTCCTTTGAAAATGAATACACAGAAGAGTACTTTGATATGCGACTTAATCTAGAGGCGCTTCAAACGAACGGATCTGCACATATTTGGATGATTTACATCAGTCGAGAACACTGTCATTTTGTGAAAACAGGAGCGCATGTCACATTTAAAGCGCAGCCAAATGTTAAGATCAATGCATGGGGGATGAGAGCTATACTCAAACAAGATATACATGACTTCAAAGTAGGGAAATACGTACTACTCTCCCAATTAAATCGTGATCATGTCCCCTTTGAGTATGTAGAAAAAAACATTGATGGGTCAGGACCTAAAATCCAGCTTCCTTATAATTGGTTTGTCACAGAAGAAGAAGAAGTTGAGAATATTGATGCAAAGGCAAAAGAAAATAACCTTTCCAATGCGGGACTTTAA 3432 0.3767 MVKTKSGLQWFWPCFGGRSSSSIVHSQGPTSSSSYQNQDYRYDVFISFRGPDTRNSFVDHLCSHLLQKGLFVLKDDHKLQKGESISRQLLQAIQQSRLSIIVFSKNYASSTWCLDEMAAIASCKQRSNHIVFPIFYDVDPSHVRHQNGVYKNDFLSHRWKFGKDRDKVPGWKRAMTDFANSAGCDIRDKPEFEQIQIIVQTVIKKLGHKFSWSVNDLIGIQPRVQALEDKLRLGSNSDDVQVLGIWGMNGIGKTTHAAVLYDKISHRFDASCFIEDVSKLYREGGHSAVQKEIIYQTLRENIDMSNPIEISRIVNNRLHSIKVLIVLDNVDELEQLENLAIKPKLLLKGSRLVITTTDEHILKVCEGECLXHKVPLLNDKDARELFCRKAFKSEEQNSNCAALIPEVLNYAQSLPLAIRVLGSFLCTRDAVEWRDVLNRLKNSPDNKIMSVLQITVDGLHHEEKQIFLHIACFFKGEREDYVKRILDCCELYPHIGISRLIQKSLITISNEELQMHELLQELGKKMVRDQSPEEPGLWSRIWLHKDFFQVLMTETGTEKVKAIVLNKKEEMAECSVGGLSRMKDLTLLILYHTRVSGRPEFLSDRLRYVLWHDYPFASLPPYFIASNLVDLNMPNSHITHLWEGRKSCPNLKRMDLSNSRYLIKTPDFSRITKLERLDLSGCTSLSEIHSSIGLLKKIAFLNLRNCCNLVIIDFGLVGNMSSLRVLHLSGCSKLESTPDFTRATHLEYIDMDECSSLSTIHQSIGVLSSLTFLSLRKCRKLVSIPNDINSLLSLQTLDLCSCSNLTDLXTKTSFFISFEILDLSFCNLQEVNEAIRELRCLERLNLQGNNFVSVPDFFSGLPRLAYLNLSYCHKLKSLLRICFKGDGSGGKYFKTVSGSRDHRSGFYLFDCPNVALEKENLEIFKLEWSLQLMKEPCNFRCGFDVVVPWNLISTFIQXNIKGDSIIRILQCGTNDNWIGFAFCVVFEGNNGDAAVRSSPHSSFSHPLYLSFENEYTEEYFDMRLNLEALQTNGSAHIWMIYISREHCHFVKTGAHVTFKAQPNVKINAWGMRAILKQDIHDFKVGKYVLLSQLNRDHVPFEYVEKNIDGSGPKIQLPYNWFVTEEEEVENIDAKAKENNLSNAGL 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02796 1145 Pfam TIR domain 42 208 IPR000157 GO:0007165
Viun5g02796 1145 SUPERFAMILY Toll/Interleukin receptor TIR domain 31 183 IPR035897 -
Viun5g02796 1145 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42 707 IPR044974 GO:0006952
Viun5g02796 1145 Pfam NB-ARC domain 224 446 IPR002182 GO:0043531
Viun5g02796 1145 Gene3D - 212 370 IPR027417 -
Viun5g02796 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 470 IPR027417 -
Viun5g02796 1145 SMART till_3 41 181 IPR000157 GO:0007165
Viun5g02796 1145 PRINTS Disease resistance protein signature 242 257 - -
Viun5g02796 1145 PRINTS Disease resistance protein signature 411 425 - -
Viun5g02796 1145 PRINTS Disease resistance protein signature 718 734 - -
Viun5g02796 1145 PRINTS Disease resistance protein signature 317 331 - -
Viun5g02796 1145 FunFam Disease resistance protein (TIR-NBS-LRR class) 38 208 - -
Viun5g02796 1145 Pfam Leucine Rich Repeat 627 644 IPR011713 -
Viun5g02796 1145 Pfam Leucine rich repeat 820 873 IPR001611 GO:0005515
Viun5g02796 1145 Gene3D Ribonuclease Inhibitor 814 891 IPR032675 -
Viun5g02796 1145 Gene3D - 376 460 IPR042197 -
Viun5g02796 1145 ProSiteProfiles TIR domain profile. 40 206 IPR000157 GO:0007165
Viun5g02796 1145 SUPERFAMILY L domain-like 528 878 - -
Viun5g02796 1145 Gene3D - 36 211 IPR035897 -
Viun5g02796 1145 Gene3D Ribonuclease Inhibitor 566 740 IPR032675 -
Viun5g02796 1145 Gene3D Ribonuclease Inhibitor 741 813 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02796 Viun-Chr5 39513087 39520823 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02796 719 876 WRKY Transcription Factor Family AT4G12020 33.333 6.84e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02796 - - vra:106778496 1759.96