Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02795 ATGCCAAAGAAGAAATCAGGGAGGAGATGGTTTTGGAGCCAGTTCTGCGCCCGATCATCAGAATCTGCTTCTTCTTCCTATCACTCCTCCGACACCATCAAAAACCAAGACTACAGATACGATGTGTTCATCAGTTTCAGAGGCCCTGATACCCGCAACTCTTTCGTTGATCATCTCTACTCTCATCTTCTCCGGAAGGGTATTTTTGTCTTTAAAGACGACCACAAGCTCCGCAAAGGAGAATCCATTTCATCACAGCTTCTACAAGCAATCAGAGGTTCTCGAATTTCTATCATCGTCTTCTCCAAAGATTATCCTTCCTCCTCGTGGTGTTTGGACGAAATGACCACTATAGCTGATTGCAAACAGCAATATAACCAAACTGTTTTCCCTGTTTTCTATGATGTTGTTCCGTCTCACGTACGACATCAGAACGGGGTATACGAGAAGGCCTTCGTTTCACTCAGACAGAAATTCAAAGGAAACCCAGATAAGGTTTATCGATGGGAGAGAGCTATGAATGGGTTTGGCAAATTAGCTGGTTGGGACGTCAGAAACAAGTCCGAATCTGAAGTAATTGAAGATATTGTTCAAAAGGTAATAAAAAAATTGGGTCACAAATTCTCTGGGTTTGTTGATGACCTTATTGGGATACAATCACGTGTACAAGCATTAGAAGATAAATTAAGATTAAGTTCAAAAAGTGGTGTTCAAGTTTTAGGAATTTGGGGAATGAATGGAATAGGAAAAACAACTCATGCCGCCGTCCTATATGACAAAATCTCTCATAGGTTTGATGCTTCTTGTTTCGTTGAGGATGTGAGCAAACTTTATAGGGATGGTGGCCAGACTGCTATACACAAAGAGATCATTAATCAAACTTTACGTGAAAACATAGATATGAGTAGTCCAATTGAAATATCAGGGATTGTAAAAAATAGGCTTCACAACATAAAGGTCCTCATAGTTCTGGACAACGTTGATGAATTAGAGCAATTGGAAAATTTGGCCATAAAACCTAAATTGCTTTTGAAGGGAAGTAGAATGGTTATTACAACCACAGATGAGCATATTCTGAAAGTGTACGAGGGTAATGTATTGATACATAAGGTTTCGTTATTGAATGATAATGATGCTCGTGAATTGTTCTGTAGAAAAGCCTTCAAAAGTGAAGAGCAAAGCAGTACTTGTGCGGTGTTGATTCCTGAAGTACTAAAATATGCCCAATGTCTTCCCTTGGCTATTAGAGTGTTGGGTTCTTTCTTGTGTACTCGAGATACTATTGAATGGAGAGATGCAATAAATAGATTGCAAAATAGTCCACATAAAAAAATTATGGATGTACTTCAAATAAGTATTGATGGACTAAACCATGAGGAAAAACAAATATTTTTACACATTGCATGTTTCTTTAAAGGGGAGAGAGAGGATTATGTTAAGCGAATTCTAGACTGTTGTGGGTTATACCCTCACATTGGAATTTCAAGACTCATTGAGAAATCACTCATCACTATTAGCAATGAAGAAATTCAGATGCATGAATTGTTACAAGAATTAGGAAAAAAAATGGTTCGCGGCCAATCTCCCGAGGAACCAGGATCATGGAGTAGAATATGGCTTCATAAAGACTTCTTGCAAGTCTTGACAACAGAAACGGGAACAGAGAAGGTAAAAGCCATAGTTTTAAATAAAAAAGAAGAATTGTTGGAATGTAGTGTTGATGGATTGTCAAGAATGAAGGAGCTTACATTACTCATATTACATCACACAAAACTTTCAGGAAGCCTGGAGTTTCTTTCTGACAGGCTGCGATATCTATTGTGGCATGATTATCCTTTTGCTTCTCTGCCTCCATATTTTACAGTCTCTAATCTTGTGGAGTTGAATATGCCTAACAGTCGCATCACACATATATGGGAAGGCCGCAAGAGCTGTCCCAACTTGAAAAGGATTGATTTAAGCAACTCCAAGAAACTGACTGAGACTTTAGATTTTTCCAGAACCATAAAACTTGAGAGGCTAGATCTTTCTGGATGTACAAGTTTATCTTATGTCCATTCATCAATTGGACTTCTTAAGAAGCTTGCTTTCTTGAATTTACGAAATTGTCGGAATCTAGTTTTCGTTGACTTTGGCTGTGTAGGCAACATGAGTTCTCTGAGAGTTCTACATCTCTCGGGTTGTTCTAAGCTTGAAAGCACCCCAGATTTTACAAGGGCAACACATCTTGAGTACCTTGACATGGATGAATGTACAAGCTTATCCACTATTCATCAATCCATTGGAGTCCTTTCAAATCTTACTTTCTTCAGTTTGAGAGGTTGCACAAAACTTGTCAGTATACCAAATGATATCAATTCCTTGGTATCTCTTCAAACTCTAGTTTTGTGCCATTGTTATAAACTTACAAGTCTGTTTCCAAGACAAGCTTCTAAATCCCATTTGGAATGTTTGATTTTTCTGGATCTAAGTTTTTGCAATCTACCAGAAGTACCTGATGCTATTGGAGAATTAAGATGTCTGGAAAGACTGAATCTACAGGGAAACAATGTTGTTTCAGTGCCTGATTCCTTCAGGGGGCTTCATTGTCTAGGATATATAAACTTGTCTCATTGTCATGAGCTTAAATCTTTGTCTAACCTTCCAATTGAAGGAGCTGCATCAGGGGGGAAGTATTTTAGAAAAGTATCCGGATCTCGTGATCATAGGAATCCTGTCATTTTCGATGTGGCTTTGACATTGTTGTTCCATGGGGTTTGGAAATTCCGCGGTGGTTCACCAAAAGATTTGAAGGGGATTCAGTTATAA 2808 0.3846 MPKKKSGRRWFWSQFCARSSESASSSYHSSDTIKNQDYRYDVFISFRGPDTRNSFVDHLYSHLLRKGIFVFKDDHKLRKGESISSQLLQAIRGSRISIIVFSKDYPSSSWCLDEMTTIADCKQQYNQTVFPVFYDVVPSHVRHQNGVYEKAFVSLRQKFKGNPDKVYRWERAMNGFGKLAGWDVRNKSESEVIEDIVQKVIKKLGHKFSGFVDDLIGIQSRVQALEDKLRLSSKSGVQVLGIWGMNGIGKTTHAAVLYDKISHRFDASCFVEDVSKLYRDGGQTAIHKEIINQTLRENIDMSSPIEISGIVKNRLHNIKVLIVLDNVDELEQLENLAIKPKLLLKGSRMVITTTDEHILKVYEGNVLIHKVSLLNDNDARELFCRKAFKSEEQSSTCAVLIPEVLKYAQCLPLAIRVLGSFLCTRDTIEWRDAINRLQNSPHKKIMDVLQISIDGLNHEEKQIFLHIACFFKGEREDYVKRILDCCGLYPHIGISRLIEKSLITISNEEIQMHELLQELGKKMVRGQSPEEPGSWSRIWLHKDFLQVLTTETGTEKVKAIVLNKKEELLECSVDGLSRMKELTLLILHHTKLSGSLEFLSDRLRYLLWHDYPFASLPPYFTVSNLVELNMPNSRITHIWEGRKSCPNLKRIDLSNSKKLTETLDFSRTIKLERLDLSGCTSLSYVHSSIGLLKKLAFLNLRNCRNLVFVDFGCVGNMSSLRVLHLSGCSKLESTPDFTRATHLEYLDMDECTSLSTIHQSIGVLSNLTFFSLRGCTKLVSIPNDINSLVSLQTLVLCHCYKLTSLFPRQASKSHLECLIFLDLSFCNLPEVPDAIGELRCLERLNLQGNNVVSVPDSFRGLHCLGYINLSHCHELKSLSNLPIEGAASGGKYFRKVSGSRDHRNPVIFDVALTLLFHGVWKFRGGSPKDLKGIQL 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02795 935 Pfam NB-ARC domain 221 444 IPR002182 GO:0043531
Viun5g02795 935 Gene3D Ribonuclease Inhibitor 539 710 IPR032675 -
Viun5g02795 935 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 732 IPR044974 GO:0006952
Viun5g02795 935 SUPERFAMILY L domain-like 571 879 - -
Viun5g02795 935 SMART till_3 39 179 IPR000157 GO:0007165
Viun5g02795 935 Pfam Leucine Rich Repeat 624 641 IPR011713 -
Viun5g02795 935 Gene3D - 374 462 IPR042197 -
Viun5g02795 935 ProSiteProfiles TIR domain profile. 38 204 IPR000157 GO:0007165
Viun5g02795 935 Pfam TIR domain 40 207 IPR000157 GO:0007165
Viun5g02795 935 SUPERFAMILY "Winged helix" DNA-binding domain 443 548 IPR036390 -
Viun5g02795 935 Gene3D - 34 209 IPR035897 -
Viun5g02795 935 PRINTS Disease resistance protein signature 715 731 - -
Viun5g02795 935 PRINTS Disease resistance protein signature 239 254 - -
Viun5g02795 935 PRINTS Disease resistance protein signature 408 422 - -
Viun5g02795 935 PRINTS Disease resistance protein signature 314 328 - -
Viun5g02795 935 SUPERFAMILY Toll/Interleukin receptor TIR domain 30 182 IPR035897 -
Viun5g02795 935 Gene3D Ribonuclease Inhibitor 713 810 IPR032675 -
Viun5g02795 935 Gene3D Ribonuclease Inhibitor 811 889 IPR032675 -
Viun5g02795 935 Gene3D - 212 368 IPR027417 -
Viun5g02795 935 FunFam Disease resistance protein (TIR-NBS-LRR class) 36 206 - -
Viun5g02795 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 211 467 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02795 Viun-Chr5 39504305 39508577 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02795 713 870 WRKY Transcription Factor Family AT4G12020 35.000 2.60e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02795 - - vra:106778496 1444.1