Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02794 ATGCCAAAGAAGAAATCAGGGAGGAGATGGTTTTGGAGCCAGTTCTGCGCCCGATCATCAGAATCTGCTTCTTCTTCCTATCACTCCTCCGACACCATCAAAAACCAAGACTACAGATACGATGTGTTCATCAGTTTCAGAGGCCCTGATACCCGCAACTCTTTCGTTGATCATCTCTACTCTCATCTTCTCCGGAAGGGTATTTTTGTCTTTAAAGACGACCACAAGCTCCGCAAAGGAGAATCCATTTCATCACAGCTTCTACAAGCAATCAGAGGTTCTCGAATTTCTATCATCGTCTTCTCCAAAGATTATCCTTCCTCCTCGTGGTGTTTGGACGAAATGACCACTATAGCTGATTGCAAACAGCAATATAACCAAACTGTTTTCCCTGTTTTCTATGATGTTGTTCCGTCTCACGTACGACATCAGAACGGGGTATACGAGAAGGCCTTCGTTTCACTCAGACAGAAATTCAAAGGAAACCCAGATAAGGTTTATCGATGGGAGAGAGCTATGAATGGGTTTGGCAAATTAGCTGGTTGGGACGTCAGAAACAAGTCCGAATCTGAAGTAATTGAAGATATTGTTCAAAAGGTAATAAAAAAATTGGGTCACAAATTCTCTGGGTTTGTTGATGACCTTATTGGGATACAATCACGTGTACAAGCATTAGAAGATAAATTAAGATTAAGTTCAAAAAGTGGTGTTCAAGTTTTAGGAATTTGGGGAATGAATGGAATAGGAAAAACAACTCATGCCGCCGTCCTATATGACAAAATCTCTCATAGGTTTGATGCTTCTTGTTTCGTTGAGGATGTGAGCAAACTTTATAGGGATGGTGGCCAGACTGCTATACACAAAGAGATCATTAATCAAACTTTACGTGAAAACATAGATATGAGTAGTCCAATTGAAATATCAGGGATTGTAAAAAATAGGCTTCACAACATAAAGGTCCTCATAGTTCTGGACAACGTTGATGAATTAGAGCAATTGGAAAATTTGGCCATAAAACCTAAATTGCTTTTGAAGGGAAGTAGAATGGTTATTACAACCACAGATGAGCATATTCTGAAAGTGTACGAGGGTAATGTATTGATACATAAGGTTTCGTTATTGAATGATAATGATGCTCGTGAATTGTTCTGTAGAAAAGCCTTCAAAAGTGAAGAGCAAAGCAGTACTTGTGCGGTGTTGATTCCTGAAGTACTAAAATATGCCCAATGTCTTCCCTTGGCTATTAGAGTGTTGGGTTCTTTCTTGTGTACTCGAGATACTATTGAATGGAGAGATGCAATAAATAGATTGCAAAATAGTCCACATAAAAAAATTATGGATGTACTTCAAATAAGTATTGATGGACTAAACCATGAGGAAAAACAAATATTTTTACACATTGCATGTTTCTTTAAAGGGGAGAGAGAGGATTATGTTAAGCGAATTCTAGACTGTTGTGGGTTATACCCTCACATTGGAATTTCAAGACTCATTGAGAAATCACTCATCACTATTAGCAATGAAGAAATTCAGATGCATGAATTGTTACAAGAATTAGGAAAAAAAATGGTTCGCGGCCAATCTCCCGAGGAACCAGGATCATGGAGTAGAATATGGCTTCATAAAGACTTCTTGCAAGTCTTGACAACAGAAACGGGAACAGAGAAGGTAAAAGCCATAGTTTTAAATAAAAAAGAAGAATTGTTGGAATGTAGTGTTGATGGATTGTCAAGAATGAAGGAGCTTACATTACTCATATTACATCACACAAAACTTTCAGGAAGCCTGGAGTTTCTTTCTGACAGGCTGCGATATCTATTGTGGCATGATTATCCTTTTGCTTCTCTGCCTCCATATTTTACAGTCTCTAATCTTGTGGAGTTGAATATGCCTAACAGTCGCATCACACATATATGGGAAGGCCGCAAGAGCTGTCCCAACTTGAAAAGGATTGATTTAAGCAACTCCAAGAAACTGACTGAGACTTTAGATTTTTCCAGAACCATAAAACTTGAGAGGCTAGATCTTTCTGGATGTACAAGTTTATCTTATGTCCATTCATCAATTGGACTTCTTAAGAAGCTTGCTTTCTTGAATTTACGAAATTGTCGGAATCTAGTTTTCGTTGACTTTGGCTGTGTAGGCAACATGAGTTCTCTGAGAGTTCTACATCTCTCGGGTTGTTCTAAGCTTGAAAGCACCCCAGATTTTACAAGGGCAACACATCTTGAGTACCTTGACATGGATGAATGTACAAGCTTATCCACTATTCATCAATCCATTGGAGTCCTTTCAAATCTTACTTTCTTCAGTTTGAGAGGTTGCACAAAACTTGTCAGTATACCAAATGATATCAATTCCTTGGTATCTCTTCAAACTCTAGTTTTGTGCCATTGTTATAAACTTACAAGTCTGTTTCCAAGACAAGCTTCTAAATCCCATTTGGAATGTTTGATTTTTCTGGATCTAAGTTTTTGCAATCTACCAGAAGTACCTGATGCTATTGGAGAATTAAGATGTCTGGAAAGACTGAATCTACAGGGAAACAATGTTGTTTCAGTGCCTGATTCCTTCAGGGGGCTTCATTGTCTAGGATATATAAACTTGTCTCATTGTCATGAGCTTAAATCTTTGTCTAACCTTCCAATTGAAGGAGCTGCATCAGGGGGGAAGTATTTTAGAAAAGTATCCGGATCTCGTGATCATAGGTCAGGCTTATATCTTTTTAATTGTGCCAATATGGTTGATATATTGTCCAAACCGTGGGATTGTTGGAGTTTGGAACTTGCATGGCTTTTCAGACTAATTAAGGAATCCTGTCATTTTCGATGTGGCTTTGACATTGTTGTTCCATGGGGTTTGGAAATTCCGCGGTGGTTCACCAAAAGATTTGAAGGGGATTCAGTTATAAGGATAGTGGAATTTAGTGTGGATGAAGACTGGATGGGCTTTGCCTTTTGTGTTATATTTGGGGGAAACACTGCTCTTGTTGTTGATGATTCTTCACCGCACCCATTATATCTTTCTTTCGTAAGTAAACATACAGAAGAATACTGTGATGTGCCACATAATGTGAACATACAACATTTTGCTAAATCAAATCATTTTTGGATCATTTATATCTCGAGAGAGCATTGTCATTTTGTGAAAACAGGAGCACATATCACATTTAAAACCCTAGCAGGGGTTAAGATCCATGCATGGGGGATGAGGAGTATATTCAAAAAAGATGTACATGACTTTAAAAGGATGCAACAAGGACAACCTCTTCCATTCCCTCGCAATGAAGTACACCCTCTCAACTTTGTTTTTGTGAAAAAAAGCAAGACCAATTCTGGTCCTGTATTCCGGCTTCCCTACAATTGGTTACTCACAAAGGAAGATGAAGTAGAGAAACATGATGCAGAAGTAAAGGAAAACAATTTGTCTTATGCAGGGTTTTAA 3444 0.3833 MPKKKSGRRWFWSQFCARSSESASSSYHSSDTIKNQDYRYDVFISFRGPDTRNSFVDHLYSHLLRKGIFVFKDDHKLRKGESISSQLLQAIRGSRISIIVFSKDYPSSSWCLDEMTTIADCKQQYNQTVFPVFYDVVPSHVRHQNGVYEKAFVSLRQKFKGNPDKVYRWERAMNGFGKLAGWDVRNKSESEVIEDIVQKVIKKLGHKFSGFVDDLIGIQSRVQALEDKLRLSSKSGVQVLGIWGMNGIGKTTHAAVLYDKISHRFDASCFVEDVSKLYRDGGQTAIHKEIINQTLRENIDMSSPIEISGIVKNRLHNIKVLIVLDNVDELEQLENLAIKPKLLLKGSRMVITTTDEHILKVYEGNVLIHKVSLLNDNDARELFCRKAFKSEEQSSTCAVLIPEVLKYAQCLPLAIRVLGSFLCTRDTIEWRDAINRLQNSPHKKIMDVLQISIDGLNHEEKQIFLHIACFFKGEREDYVKRILDCCGLYPHIGISRLIEKSLITISNEEIQMHELLQELGKKMVRGQSPEEPGSWSRIWLHKDFLQVLTTETGTEKVKAIVLNKKEELLECSVDGLSRMKELTLLILHHTKLSGSLEFLSDRLRYLLWHDYPFASLPPYFTVSNLVELNMPNSRITHIWEGRKSCPNLKRIDLSNSKKLTETLDFSRTIKLERLDLSGCTSLSYVHSSIGLLKKLAFLNLRNCRNLVFVDFGCVGNMSSLRVLHLSGCSKLESTPDFTRATHLEYLDMDECTSLSTIHQSIGVLSNLTFFSLRGCTKLVSIPNDINSLVSLQTLVLCHCYKLTSLFPRQASKSHLECLIFLDLSFCNLPEVPDAIGELRCLERLNLQGNNVVSVPDSFRGLHCLGYINLSHCHELKSLSNLPIEGAASGGKYFRKVSGSRDHRSGLYLFNCANMVDILSKPWDCWSLELAWLFRLIKESCHFRCGFDIVVPWGLEIPRWFTKRFEGDSVIRIVEFSVDEDWMGFAFCVIFGGNTALVVDDSSPHPLYLSFVSKHTEEYCDVPHNVNIQHFAKSNHFWIIYISREHCHFVKTGAHITFKTLAGVKIHAWGMRSIFKKDVHDFKRMQQGQPLPFPRNEVHPLNFVFVKKSKTNSGPVFRLPYNWLLTKEDEVEKHDAEVKENNLSYAGF 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02794 1147 Gene3D Ribonuclease Inhibitor 739 929 IPR032675 -
Viun5g02794 1147 Gene3D Ribonuclease Inhibitor 559 738 IPR032675 -
Viun5g02794 1147 Gene3D - 208 370 IPR027417 -
Viun5g02794 1147 SUPERFAMILY Toll/Interleukin receptor TIR domain 30 182 IPR035897 -
Viun5g02794 1147 FunFam Disease resistance protein (TIR-NBS-LRR class) 36 206 - -
Viun5g02794 1147 SMART till_3 39 179 IPR000157 GO:0007165
Viun5g02794 1147 Pfam NB-ARC domain 221 444 IPR002182 GO:0043531
Viun5g02794 1147 Pfam Leucine Rich Repeat 624 641 IPR011713 -
Viun5g02794 1147 Gene3D - 374 462 IPR042197 -
Viun5g02794 1147 ProSiteProfiles TIR domain profile. 38 204 IPR000157 GO:0007165
Viun5g02794 1147 Pfam TIR domain 40 207 IPR000157 GO:0007165
Viun5g02794 1147 Gene3D - 34 207 IPR035897 -
Viun5g02794 1147 Pfam C-JID domain 953 1078 IPR045344 -
Viun5g02794 1147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 467 IPR027417 -
Viun5g02794 1147 PRINTS Disease resistance protein signature 239 254 - -
Viun5g02794 1147 PRINTS Disease resistance protein signature 314 328 - -
Viun5g02794 1147 PRINTS Disease resistance protein signature 408 422 - -
Viun5g02794 1147 PRINTS Disease resistance protein signature 715 731 - -
Viun5g02794 1147 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 731 IPR044974 GO:0006952
Viun5g02794 1147 SUPERFAMILY L domain-like 524 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02794 Viun-Chr5 39503718 39508569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02794 713 871 WRKY Transcription Factor Family AT4G12020 34.807 2.39e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02794 - - vra:106778496 1649.41