Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02791 ATGGATAAGAAAGAGATGACTGATTATCAAATAGTACTCAAGGATCTCGAAGGGATTTATGAGAATGATACCTTGGAAAACAACAATGGGTGTGGATCATCGACATTTGATTGTGCACAGTTTGCAGATGTTAATGCTATTTCATTGGGTTCTAGTTCCAAAGAAGCCTTGGGAATGGACCGAGCCAGTGACATTCTCTTAGAATTTTCGATATATACTATGAGAAGTGAAATCATTGAGCATGCATTTTGTGGCATGGATGAGTTGTCAAAGATGGGATCTGCAGGACAACCTTTGTGGCAGCGACAACAGGGAAACAATGGGTGTGAGATTTTGAATGATGGTGAATATTCGAAGCAGTTTGCTGAGGTTGATACCACGCTAAGCGAGATTGTTAAGTTGATGGAGGTTGGAGAGTCTCAAAATTTACCTAGCTTTGACCCGTATCAAACTGAGCTTCCATTAACAACCACTGTAACTCCCACTGCAACTCCACAGTCGGAAGGATCGAGAGCTATGGCTTATATCAAGATGGCGCCAATCTGCATTGTTGAATTACTCATGGAAGTGAATCAATGGTCTGAAGCGTTTTACACTATTGTCTCAAAAGCTGCAACAGTAGGAACTTTGTTAGGAGTGGATGGAAGCTACGATAACAGAATGCAGGTGATGAGCGCAGAACTTCATTTGCCCTCCCCTGTTTTATTGACCAGGGAGTGTTATTTCGGAAGGTACAGCAAGCAGTTATCTAATAACACATGGGGGATTGTAGATGTGTCATTGGACAAATTTGTTCCTTCTCCAGCCAACAATTTTCGGAAAAAACCATCTGGATGTTTAATTACTGGAATGCCCAATGGACACTCAAAGGTCATATGGGTGGAGCATGTTGAAGTAGAAGATAGTCATGTGGACCAATATTTCCAGTCTCTGTTCACCTCCACTCTAGCTTTTGGCGCAACTCGTTGGATCAATGCCTTAATTCGATATGGTGAATGGTTACAATGTGTATTTACAACAGCATTGATTGCTGACGAAGGAGTTTGTATACCCCAAATGGGGAGAACTAGTTTGTTGCAACTGGCTGATAGAATGATGAAAACATTTTGTGGAAACACGAGTTCTAGCGCAGACAATCCATGGACCCAAATGGCTCATTCCCCATACGTGAGAATCATGGTGAAGAATAACATGGGAGAAGCTGGAAAGCCTCCAGGTACATCCGTTGTTTTCACTACTTCTCTCTGGCTTGATGTCTCCCCGAATCGACTGTTCAACTTCCTCCGCCATGGGAATTCCAGACCCAAGTGGGATTCACTTTCACGTAGACATACTATTCGAGAATTTGCGTCAATGCTGAAGGGTGAAAATCCAGGAAATCGTGTTTCCCTGATGAGAGCCAATAATTCACAGGGCAAGCTTGTAATCTGTTATCTGCAAGAGAGTTACACAGACTCAACAGGTTCTTACGTTGTGTATGCTCCTCTGGATGAGTCAGCTGTGGCAGCTCTAATACATGGAGTCAACCCTGACAAGGTGATGATCCTACCATCAGGGTTTAGCATTCTTCCTGAAAGGTTGCAGGGAGTTGAAGATAGAAACGCTCGCAGTCTTCTAACTATTGCATTCCACATAGTTGAAAGTAGCACCTGTAAGCCATATCTCGCTCCGGAATCAGTCGAAACCATATACAAAGTCATTTCAGATACTGTTTCCTCTATAACAAACTCTGTGCTGTATCATAATCATCGCAACAATTGGAAGGATTTAAATTTCTAG 1779 0.425 MDKKEMTDYQIVLKDLEGIYENDTLENNNGCGSSTFDCAQFADVNAISLGSSSKEALGMDRASDILLEFSIYTMRSEIIEHAFCGMDELSKMGSAGQPLWQRQQGNNGCEILNDGEYSKQFAEVDTTLSEIVKLMEVGESQNLPSFDPYQTELPLTTTVTPTATPQSEGSRAMAYIKMAPICIVELLMEVNQWSEAFYTIVSKAATVGTLLGVDGSYDNRMQVMSAELHLPSPVLLTRECYFGRYSKQLSNNTWGIVDVSLDKFVPSPANNFRKKPSGCLITGMPNGHSKVIWVEHVEVEDSHVDQYFQSLFTSTLAFGATRWINALIRYGEWLQCVFTTALIADEGVCIPQMGRTSLLQLADRMMKTFCGNTSSSADNPWTQMAHSPYVRIMVKNNMGEAGKPPGTSVVFTTSLWLDVSPNRLFNFLRHGNSRPKWDSLSRRHTIREFASMLKGENPGNRVSLMRANNSQGKLVICYLQESYTDSTGSYVVYAPLDESAVAALIHGVNPDKVMILPSGFSILPERLQGVEDRNARSLLTIAFHIVESSTCKPYLAPESVETIYKVISDTVSSITNSVLYHNHRNNWKDLNF 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02791 592 ProSiteProfiles START domain profile. 71 336 IPR002913 GO:0008289
Viun5g02791 592 Pfam START domain 158 330 IPR002913 GO:0008289
Viun5g02791 592 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 60 577 IPR042160 -
Viun5g02791 592 SMART START_1 124 333 IPR002913 GO:0008289
Viun5g02791 592 SUPERFAMILY Bet v1-like 352 544 - -
Viun5g02791 592 SUPERFAMILY Bet v1-like 169 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02791 Viun-Chr5 39483675 39490124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02791 64 578 Homeobox Transcription Factor Family AT4G04890 40.520 1.66e-115 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02791 K09338 - jre:108992281 469.159