Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02788 ATGGCCACCATCTTTTTAAGGTCCAATGAAGTGCTTCATGCCTTGCTCTTCTTCTGTCTCTTGCTCATGGTGCACCACTGTGGTGCCTATGAATTCATAGTTGGAGGCCAAAAGGGTTGGAGTGTGCCAAGTGACCCCAATTCTAACCCTTACAGTCAATGGGCTCAAAAGAGCAGATTTCAAATAGGAGACTCCTTAGTGTTCAATTACCCTTCTGGCAAAGACTCAGTGATTCAAGTAAGTAGCAAGGACTATGAGAGTTGCAACACTGATGCATATAATGAAAAATTCTCAGACGGTCACACAGTCATCAAGCTCAACCAATCAGGGCCTCACTATTTCATCAGTGGAAACAAAAACAACTGTCTGAAAAATGAGAAACTGGTGGTGATTGTTCTGGCTGACAGGAACAACAAAAACACATACACCAACCAAACAAGTCCTTCACCTTCTCCTTCTCAGTATACAACAGAATCAGTAGCTCCATCCCCGGCACCTTCTCAGCAACAGGTTCCATCTCCAGGGGCAGCACCTCCTCAGCAAAATACTGCTTCTCCACCATCTCCACCCTCTGACCAAACACCAGCTCCAGCTCCTGTTACTGATCAACCTTCTCCTCCTTCTCCTCCTCACAATGCTGCTTCTTCAATTCTGGTCAGTTTTGCTGGTTCTGTTGGAGCATTATTCATGGCCTCAGTTCTGGTTTTTTCTTTCTAA 717 0.4519 MATIFLRSNEVLHALLFFCLLLMVHHCGAYEFIVGGQKGWSVPSDPNSNPYSQWAQKSRFQIGDSLVFNYPSGKDSVIQVSSKDYESCNTDAYNEKFSDGHTVIKLNQSGPHYFISGNKNNCLKNEKLVVIVLADRNNKNTYTNQTSPSPSPSQYTTESVAPSPAPSQQQVPSPGAAPPQQNTASPPSPPSDQTPAPAPVTDQPSPPSPPHNAASSILVSFAGSVGALFMASVLVFSF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02788 238 FunFam Early nodulin-like protein 9 30 144 - -
Viun5g02788 238 CDD OsENODL1_like 30 133 IPR041846 -
Viun5g02788 238 MobiDBLite consensus disorder prediction 167 211 - -
Viun5g02788 238 Gene3D - 30 146 IPR008972 -
Viun5g02788 238 MobiDBLite consensus disorder prediction 140 214 - -
Viun5g02788 238 MobiDBLite consensus disorder prediction 140 166 - -
Viun5g02788 238 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Viun5g02788 238 PANTHER BLUE COPPER PROTEIN 30 162 IPR039391 GO:0009055
Viun5g02788 238 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Viun5g02788 238 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02788 Viun-Chr5 39456088 39457264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02788 11 217 Phytocyanin Superfamily AT3G20570 49.038 2.84e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02788 - - gmx:100788637 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02788 5 39456088 39457264 Viun5g02788 5 39456088 39457264 ECH