Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02764 ATGAAGATGGCTATTCAACAATATATGGGTACCATAAAGGTTATCTTTTGCAGCATTTTGGTTTTTCATATTTTGGTCGTAGTGAGCAGTGAAGAGAAAAAAACTCAAGAAGAATTGATCAGCCAATTGTTTGATCCAACATCTGGATTATTAACTGAGGATACGGCAAAGGTGTTATGGATCATATGTTGGGAAGATTTGATTCGATTAAAGAAAGAAGTCGACGATTTCAGCTTGTGCCTCCCAAAGGAATCTTGCAGAAACAGCAATGAAGTTAATGTAGAAATTGGGTCAGTAGCCAGAGAAAACATCCAACAAATGATTCATGCATGTTATCCTCAATTAAAGGAAAATGTTCTTAAGTGTTTTAGAAAAAACAATTTTCCAATCCATGCTCTGGGGGAAGAGGATTCCTCTAAGATCTGGCATGCAACATACATGGTATCACCTTCATCTAGAAGATATCTGGGTCAAGTTTCTCCCCAGCACCTATCAGAAACAGCAAACAAGGAACATGAAATACATATAAGCATTAAAGATCAAGCAGATGCAAAAGGATCTGGAGGTGGCATGGCAATACCTCTGGTGGGAGCAGTTGTAGCTGTGGTATTGGTCATTTTGTGTTGTTATCTATTTTGTGGGAGTGGACAAGTTAGCCAGAATGATGAGAGACCCCTTCTCAGCATGAGCATGAATGACTCTCTTGGTTCTTCTTCGAACCATATTCAATTCAAGAATTCAATGAAAGAAGGAGAAATTGGGATTGACTCGTCAAGTATTGAATTAGGTGATGAGAAGAGAAACTCAATCTCGGTGAATAATGAAGATGAATCAGGGGAAGTTGGTAGTTCTTCTGTGAGACCATCATTTGAACTGAAACCTCCTCCTGGGAGAGTAGTTTCAAGTAATGGATTGCCTCCTTTGAAACCCCCTCCTGGAAGGCCTGATCTTCTTCCTCCTCCTCCTGGAAGAACTGATCTTCTTCCTCCTCCTCCTGGAAGAACCGATCTTCTTCCTCCTCCTCCTGGAAGAACTGATCTTCTTCCTCCTCCTCCGGGAAGGCCTGATCTTGCTCCTCCTCCTCCTGAACCAGATAAACCTTCTGATATTCTTCCTCTAAAACCTCCTCCTGGAAGACCTGATCTTGCTCCTCCTCCAGCAGCACCAGCAGCACCAGCACCACCTCCTCCACCGCCTCCACCTCTTCCACCTTCTTCTTCTACTTCTAATTCTGGTCCTCCCCCTCCTCCTCCTCCTCGTGCACCGCCGAAGCCTGGCGGTGCCGGACCTCCACCTCCTCCACTTCCTGGTGGCCCCAGAGGACCTCCCCCTCCTCCTGGCAATGGCCCTAGAGCTCCACCACCACCTCCAATGAGAGGCAAGGGTCCTCCTGGTCCCCCTGGTGCTGGTCCTAGACCTCCTCCACCCCCCGGTGCTGGTGGAGGTCATGCAAGAGCTGCTTCCAATCCAAAGGTTGTTGAGGAAGCCAGTTTTGATGGGGAACCGTATGTTCCTAAAACTAAGTTAAAGCCTTTCTTCTGGGATAAGGTTCAAGCTAACGATCAAGCAATGGTATGGAATCAACTCAAAGCAGGATCCTTCCAGTTTAATGAAGAAATGATCGAGACACTCTTTGGCTTTAATGCTGTGAGTACGGATAAAGGAAAGGCACCGAAAAAAGAGCCTGCCCAAGCTACTCCCCAACTTATACAAATCGTCAACGCAAAGAAAGCACAGAATTTATCTATTCTATTAAAAGCATTAAATGTCACCGCAGATGAAGTTTGTGATGCACTTCTTGAAGGAAATGAGCTTCCCGTAGAGTTCCTTCAAACCTTGTTGAAGATGGCACCAACGCAGGACGAAGAACTTAAGCTTAGAGTTTTCAGTGGTAATCCAGCCCAACTCACCCCTGCAGATAGGTTCCTTAAAGCCATAGTTGACATTCCTTGTTCTTTTAAACGAATGGAAGCATTAATTTACATGGGTACTCTTCAAGAGGATGTCACTAGTACTCGAGACTCCTTTGCAATTTTAGAGGTTGCTTGTAAAAAGCTAAGAAGTAGTCGATTATTCCTGAAACTTCTTGAAGCTGTTCTGAAAACTGGGAATCGTATGAATGATGGGACATTCCGTGGTGGTGCACAAGCATTCAAACTTGACACACTGTTGAAACTATCTGATGTAAAAGGAGTAGATGGCAAGACCACACTCTTGCACTTCGTTGTTCAAGAGATAGTGCGCACCGAGGGCATAAGAGCAGCACGCATGGCAAAAGAGAATCACAGTTTCTCGAGCATAAAAACAGAAGACCTTCTAGACGAAGTCTCAAATGATTCAGATGAGCACTATCGTGAACTTGGTCTTCAAGTGATTTCATATTTAAGCACCGAACTTGAGAGTGTGAAAAAAGCAGCAGCTTTAGATGCTGATGGGTTGGTAGGAACAACTTCAAGAGTAGGGCATGGTCTCATAAAAACAAGAGACTTTGTGAACAAAGAGATGAGCAATGTGAAGGGTGATAAAGGGTTTATTGAGACAGTGAAGAGCTTCATAGACAGAGCTGAGGCTGATGTCAAAAGTTTGCTAGAAGAGGAGAAGAAAATCATGGGTCTGGTGAAGAGCACTGGTGATTACTTTCATGGGGACACAGGGAAGGATGAAGGGTTGAGATTATTTAACATAGTACGAGAGTTCTTAGTAATGTTGGATAAGGTGTGCAAGGAGATACAACTTGCACCACCAAAGAAGCCAGCAGCACCAGCAGCACCAAAAGGTGCAAAGCAAGAAACACCTAATAATTCTACTGCAAAGCAAGAAACGCCTAATTCTAGTGCAAAGCAAGAAACACCTAATTCTGGTGCAAAGCAAGAAACACCTAATTCTAGTGCAAAGCAAGAAACGCCTAATCCTCCTCTTCCTCCTGCTCATGATTTAATTCGTCAAAGAATTTCTCCAGTAATTGCAAGTAGGAGGCCAGATGACTTTAGTTCAGATGATGATGACAGTCCTTAG 3015 0.4395 MKMAIQQYMGTIKVIFCSILVFHILVVVSSEEKKTQEELISQLFDPTSGLLTEDTAKVLWIICWEDLIRLKKEVDDFSLCLPKESCRNSNEVNVEIGSVARENIQQMIHACYPQLKENVLKCFRKNNFPIHALGEEDSSKIWHATYMVSPSSRRYLGQVSPQHLSETANKEHEIHISIKDQADAKGSGGGMAIPLVGAVVAVVLVILCCYLFCGSGQVSQNDERPLLSMSMNDSLGSSSNHIQFKNSMKEGEIGIDSSSIELGDEKRNSISVNNEDESGEVGSSSVRPSFELKPPPGRVVSSNGLPPLKPPPGRPDLLPPPPGRTDLLPPPPGRTDLLPPPPGRTDLLPPPPGRPDLAPPPPEPDKPSDILPLKPPPGRPDLAPPPAAPAAPAPPPPPPPPLPPSSSTSNSGPPPPPPPRAPPKPGGAGPPPPPLPGGPRGPPPPPGNGPRAPPPPPMRGKGPPGPPGAGPRPPPPPGAGGGHARAASNPKVVEEASFDGEPYVPKTKLKPFFWDKVQANDQAMVWNQLKAGSFQFNEEMIETLFGFNAVSTDKGKAPKKEPAQATPQLIQIVNAKKAQNLSILLKALNVTADEVCDALLEGNELPVEFLQTLLKMAPTQDEELKLRVFSGNPAQLTPADRFLKAIVDIPCSFKRMEALIYMGTLQEDVTSTRDSFAILEVACKKLRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIVRTEGIRAARMAKENHSFSSIKTEDLLDEVSNDSDEHYRELGLQVISYLSTELESVKKAAALDADGLVGTTSRVGHGLIKTRDFVNKEMSNVKGDKGFIETVKSFIDRAEADVKSLLEEEKKIMGLVKSTGDYFHGDTGKDEGLRLFNIVREFLVMLDKVCKEIQLAPPKKPAAPAAPKGAKQETPNNSTAKQETPNSSAKQETPNSGAKQETPNSSAKQETPNPPLPPAHDLIRQRISPVIASRRPDDFSSDDDDSP 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02764 1004 Coils Coil 845 865 - -
Viun5g02764 1004 Pfam Formin Homology 2 Domain 501 903 IPR015425 -
Viun5g02764 1004 MobiDBLite consensus disorder prediction 305 480 - -
Viun5g02764 1004 Gene3D Formin, FH2 domain 504 946 IPR042201 -
Viun5g02764 1004 SMART it6_source 499 918 IPR015425 -
Viun5g02764 1004 MobiDBLite consensus disorder prediction 915 1004 - -
Viun5g02764 1004 MobiDBLite consensus disorder prediction 928 966 - -
Viun5g02764 1004 PANTHER FORMIN-RELATED 161 956 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Viun5g02764 1004 MobiDBLite consensus disorder prediction 257 491 - -
Viun5g02764 1004 SUPERFAMILY Formin homology 2 domain (FH2 domain) 512 911 - -
Viun5g02764 1004 ProSiteProfiles Formin homology-2 (FH2) domain profile. 499 929 IPR015425 -
Viun5g02764 1004 MobiDBLite consensus disorder prediction 259 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02764 Viun-Chr5 39174454 39178752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02764 505 994 FH2 protein (formin) Gene Family AT5G54650 59.553 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02764 - - vun:114183601 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02764 5 39174454 39178752 Viun5g02764 5 39174454 39178752 ECH
Viun5g02764 5 39174454 39178752 Viun11g01034 11 21838417 21845717 PCT