Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02741 ATGGTGTGTGATCTATGTAGCAGACGAGGGGAGAAGGGTACAGAGAATAGTTTCAGATCGATGTTGCAAGAGAACTTGAGCTCATCAAGAACAAATTTTCAGCAAGAGACTGGGGTGGAGTTGTCTCAGCAAGTTCAGTGGAGGTCAGAGAAGATGTTCTCTGCAGAATCTTCAAGCAATGAGTTCAAGCAAGTGAATAGGGGTTTCTCGTTGGATCAAAGCAAGTTTAGTCCACAATATAGTTCTGGGGACAGCACAGTGACAAGCCAAGGGTTACCCTCTTCTAACTTTCAGATGGATTCCTCAGCCTTATATGGGACCCCTTCAATATTGCAAGGACTATTGGGACCTGATCACAATAACCAACAACAACCTTCTTCCTTTGAGAACCGCTCCATGAGTTTCCCATACCCAACAACATATGGATTAAACTCTAATAATGAGTTAATCCCTTCCTGGTCCAAAGTTCCTCAATTTTTGAGAGGTTCACCTCCAAAACAACCACCCAATAACCAGCTCCATTTCACTAACAACGCACCCTTTTGGAACGCTTCTGAGGCTGCAAACTTCAAAGATGTTCGCTCCAGCTTCTTCCCTTCATTGCAACCCCCCTTCTCTACGCCAAATTTTGAAGTACAGTCAAAGAATATATCTGAAGTTAGGGAGTCTGGTAATGTGGGAAAGAAAAGTGGGAATGAGCCAGCACCCAAAAGGACCCGTAACGAAACACCATCTCCTATGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTGTCGCCTTTCGGAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCACGAACAGGTCACTGCCTTAAGTACACCGTATATGAAAAGTGGAGCTCCAATACAGATTCAACAGGTACCATACAATTCTGGTAAATGTAAGGAAACTGAGGGACCAAAGCAGGATCTAAGAAGCCGAGGGCTATGCTTGGTGCCTGTTTCGAGCACATTCCCAGTAACTCATGAAACCACAGTGGATTTTTGGACACCAACATTCGGAGGAGCTTCGAGATAG 1095 0.4466 MVCDLCSRRGEKGTENSFRSMLQENLSSSRTNFQQETGVELSQQVQWRSEKMFSAESSSNEFKQVNRGFSLDQSKFSPQYSSGDSTVTSQGLPSSNFQMDSSALYGTPSILQGLLGPDHNNQQQPSSFENRSMSFPYPTTYGLNSNNELIPSWSKVPQFLRGSPPKQPPNNQLHFTNNAPFWNASEAANFKDVRSSFFPSLQPPFSTPNFEVQSKNISEVRESGNVGKKSGNEPAPKRTRNETPSPMPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTALSTPYMKSGAPIQIQQVPYNSGKCKETEGPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGASR 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02741 364 Gene3D - 251 307 IPR036638 GO:0046983
Viun5g02741 364 MobiDBLite consensus disorder prediction 219 248 - -
Viun5g02741 364 SMART finulus 252 296 IPR011598 GO:0046983
Viun5g02741 364 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 241 290 IPR011598 GO:0046983
Viun5g02741 364 FunFam Transcription factor bHLH123 family 251 313 - -
Viun5g02741 364 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 77 345 - -
Viun5g02741 364 CDD bHLH_AtbHLH_like 247 298 IPR045239 -
Viun5g02741 364 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 251 308 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02741 Viun-Chr5 38867890 38871642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02741 8 364 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 48.232 5.27e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02741 - - gmx:100778697 619.002