Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02730 ATGTTGCATATTAACAATGAGGGGAATCTTGTGCTTGTTAACCATAACGGGTTTGTGGCTTGGTCAGCAAACTCCAAAAAGAAGGTTCAGAATCCCATTGTTCAGCTCTTAAATTCTGGGAATTTGGTAGTGAGAGATGAAGGAGACCAAGATCCTGAAAACTACTTGTGGCAAAGCTTTGATTACCCTTCTGATACACTTTTACCAGGAATGAAGCTGGGTTGGGACCTAAGAACCGGCCTTGAGCGGCGTGTATCTGCTTGGAAGAATTGGGATGATCCATCACCGGGTGATTTCAGTTGGGGTATCTCTCTGGAAGGATTTCCTCAAGTGATGATGTGGAAGGGATCAAAGGTGTTTTACCGTGGTGGTCATTGGAATGGCCTCGGATTCAGTGGTGCCCCAGAATTGAAGGCAAATCCAGTTTTTAAATTCAAGTTTGTTTCCAACGAGAATGAGGTGTACTACACCTACAGCCTCAGGAATGAGTCTATGATTTCAAGGATTGTCATGAACCAATCTATTTCCACTCGCCAAAGGTACGTATGGATTGAAGATGCTAAAGCTTGGAGGCTTTATGCATCTGTACCTAGAGATAACTGTGATTCCTACAATATCTGTGGACAAAATGGGAATTGTGTGATTGGTGATTCTCCAGTGTGCCAGTGTTTAAGTGGATTTAAACCAAGATTGTCAAGGCACTGGGACATGATGGACTGGACTCAAGGATGTTTTCTATCTGAAGAATGGAATTGTGAGGAAAGGAGGAAACATGGGTTTGTTAAATTTAGTCAGCTGAAAGCTCCAGATACTTCAAATTCTTGGGTCAATGAGAGTATGAGTCTCATTGAGTGCAGGGATAAATGCTTGGAGAATTGTTCCTGTAAAGCTTATGCAAATACAGATGTTAGTGGAGGAGGTAATGGCTGTTTGATGTGGTTTGGTGATCTCAGAGATATGAGAGAGTTTTCTGCTGGTGGTTGGGATTTATATATTAGAACTAAAATTTCAGAATCAGAATTTACTCTGCTCTCTCAATTCTATATAAATCATGAAGGTGAGAAAAAAAACCATAGGATGAAGGTGGTAGCAGTAATCCTCACAATAGCCGCAGTTCTTACAACCATTCTGGTTTTGTACCAATTTGGAAAGAGAATGAAAAAGTTCAGAGCATGTGAATCAAGTAATTCCTTGATGGTAGATAATAATAAAGATGAGGAAGAGCTTGAGCTTCCTTTCTTTGATCAAGCTGCAATCGCCAAAGCAACTAATGGCTTCTCAATTGACAATAAGCTTGGAGAAGGTGGATTTGGGACAGTATATATGGGTACCCTAGCAGATGGACAACAAATTGCTGTGAAAAGACTCTCACAAAGTTCTGGACAAGGGTTTAATGAATTTAAGAATGAAGTCATATTGATAGCCAAACTTCAGCATCGGAACCTAGTTAAACTTGTTGGTTGTTGCATTGAAGGAGAGGAGAAGATGCTTATCTATGAATACATGCCCAACAAAAGCCTTGACTCCTTTATATTTGATCAGGCAAAGGCTAAAATTTTAGATTGGTCTAAACGCTTCGATATTATTTGTGGAGTTGCACGAGGACTTCTGTATCTTCACCAAGATTCTAGATTGAGAATTATACATAGAGACCTGAAAGCAAGTAATGTCCTACTTGATCATGAGTTCAACCCAAAAATATCTGATTTTGGCATGGCTAGAACTTTTGGAGGAGATCAGATTGAAGGAAATACAAAAAGGGTGGTTGGAACATATGGTTACATGGCACCTGAATATGCCATTTATGGACTATTCTCAGTGAAATCTGACGTCTTCAGCTTCGGAGTACTAATGCTAGAGATTATAAGTGGAAAGAAGAACAGAGGTTTTTCCCATTCAAATAATAGTATTAACCTTATTGGACAAGCATGGAAATTTTGGAAAGAAACCAGACCTTTGGACTTAATTGATTCATGCATGGAGAATTCATCTGTTGTATCAGGAGCATTGCGTTGTATCCATATCAGTCTTTTATGTATTCAACAGCATCCTGAGGATAGGCCAAGTATGTCCACTGTGGTAGTGATGCTGAGCAGTGAGAGTTCCCTACCTCAACCTAAGGAACCTGGTTTCCTTATGGAGAAGGAGAAAATTTTTCTTGGAGCAGAGTCCTCTACCAAGCACCTCTTTTCTTCTACCAATGATATAAGTCTTACCATGTTAGAGCCTCGGTAG 2235 0.4 MLHINNEGNLVLVNHNGFVAWSANSKKKVQNPIVQLLNSGNLVVRDEGDQDPENYLWQSFDYPSDTLLPGMKLGWDLRTGLERRVSAWKNWDDPSPGDFSWGISLEGFPQVMMWKGSKVFYRGGHWNGLGFSGAPELKANPVFKFKFVSNENEVYYTYSLRNESMISRIVMNQSISTRQRYVWIEDAKAWRLYASVPRDNCDSYNICGQNGNCVIGDSPVCQCLSGFKPRLSRHWDMMDWTQGCFLSEEWNCEERRKHGFVKFSQLKAPDTSNSWVNESMSLIECRDKCLENCSCKAYANTDVSGGGNGCLMWFGDLRDMREFSAGGWDLYIRTKISESEFTLLSQFYINHEGEKKNHRMKVVAVILTIAAVLTTILVLYQFGKRMKKFRACESSNSLMVDNNKDEEELELPFFDQAAIAKATNGFSIDNKLGEGGFGTVYMGTLADGQQIAVKRLSQSSGQGFNEFKNEVILIAKLQHRNLVKLVGCCIEGEEKMLIYEYMPNKSLDSFIFDQAKAKILDWSKRFDIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDHEFNPKISDFGMARTFGGDQIEGNTKRVVGTYGYMAPEYAIYGLFSVKSDVFSFGVLMLEIISGKKNRGFSHSNNSINLIGQAWKFWKETRPLDLIDSCMENSSVVSGALRCIHISLLCIQQHPEDRPSMSTVVVMLSSESSLPQPKEPGFLMEKEKIFLGAESSTKHLFSSTNDISLTMLEPR 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02730 744 Gene3D - 1 60 IPR036426 -
Viun5g02730 744 ProSiteProfiles Protein kinase domain profile. 426 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02730 744 SMART ntp_6 255 334 IPR003609 -
Viun5g02730 744 ProSiteProfiles PAN/Apple domain profile. 252 335 IPR003609 -
Viun5g02730 744 Pfam D-mannose binding lectin 2 89 IPR001480 -
Viun5g02730 744 SMART serkin_6 426 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02730 744 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 390 501 - -
Viun5g02730 744 Pfam Protein tyrosine and serine/threonine kinase 427 696 IPR001245 GO:0004672|GO:0006468
Viun5g02730 744 Pfam PAN-like domain 252 320 IPR003609 -
Viun5g02730 744 ProSiteProfiles EGF-like domain profile. 197 233 IPR000742 -
Viun5g02730 744 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 502 705 - -
Viun5g02730 744 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 688 - -
Viun5g02730 744 Gene3D Phosphorylase Kinase; domain 1 400 501 - -
Viun5g02730 744 Pfam S-locus glycoprotein domain 121 230 IPR000858 GO:0048544
Viun5g02730 744 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 94 IPR036426 -
Viun5g02730 744 ProSiteProfiles Bulb-type lectin domain profile. 1 57 IPR001480 -
Viun5g02730 744 CDD STKc_IRAK 432 697 - -
Viun5g02730 744 CDD PAN_AP_plant 251 334 - -
Viun5g02730 744 ProSitePatterns Protein kinases ATP-binding region signature. 432 454 IPR017441 GO:0005524
Viun5g02730 744 SUPERFAMILY Protein kinase-like (PK-like) 411 697 IPR011009 -
Viun5g02730 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 547 559 IPR008271 GO:0004672|GO:0006468
Viun5g02730 744 PIRSF SRK 1 744 IPR024171 GO:0004674
Viun5g02730 744 Gene3D Transferase(Phosphotransferase) domain 1 502 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02730 Viun-Chr5 38820140 38824932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02730 353 714 Receptor kinase-like Gene Family AT4G23230 54.396 1.41e-132 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g02730 PK_Tyr_Ser-Thr 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02730 - - cave:132173746 987.638