Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02727 ATGGAAAGAGTTGTTACCTTGCTTCTGTTCTGCGTTGCTTTGCTGAATAGTGTAGCAGCTACCTCTGTGAGAGAAAGTATTAATGTATTGCAATCTATCAGTGATGGCCAAGTCATTGTTTCACCTGGCAAAATCTATGCACTGGGATTCTTCAGTCCACCACAATCCAAGAACCGTTATGTGGGAATTTGGTATAATGAGATCCCAACACAGACTGTAGTATGGGTTGCCAACAGAGACAACCCTCTTCATGACTCATCAGGGGTTTTGAAGCTCGATGAAACTGGAGTTCTTGTTCTTCTCAGGCACAACAAGAGTGTGATCTGGTCTTCCAACACAACAGGCTCAGCACGACACCCGGTGGTGGCAAAACTTTTGGATACTGGAAATCTCATTGTGCAGAATGGAAACGGCAATGATGAGGCAAAGGATTTACTGTGGCAAAGTTTTGATTATCCAGTGGACACACTCTTGCCAGGACAGAAGTTTGGAAGAAATATAGTGACAGGTCTGAATCGATACTTGTCGTCATGGAATAGCTCTGAGGATCCATCTCATGGTGTATATAGTTATCAACTTGATATCACTGGATATCCACAGTTTATTTTGAGAGAAGGAACCACTAAAACATATCGTTTTGGATCATGGAATGGTGTTCAGTTCAGTGGGGCACCTCTGTTGAAACAAAGTGATTATACTAGATTTAGTTTTATTTCGAACGAGGAGGAGTTGTATTTCATGTTTGAGCATACCAACAAGTCATTTTTACATAGGATGGTGCTAACACCGGAGGGACATATACAGGGGACCTTCTGGGATAATGTACGAAAACATTGGAGCTTGCATGCACGAATTCCGGTGGATGACTGTGATTACTACGGCAAATGTGGAGCCTATGCTACCTGCAATATAGACAAAATCCCTCCATGTCAATGCTTGGATGGATTTGTGCCCAAAACGGCTGACTTGTACGGTGGTTGTGTCAGGAGAACTTCACTGAGTTGTCATGAAGATGGGTTTTTACAGGTTTCAGGGTTGAAATTACCAGACACAGAGAAATCCTGGTTTTCAAGAAATATGAGCCTTGAGGATTGTAAGATATTGTGCAGGAAAAACTGCTCCTGTAAAGCTTATGCAGCATTGGATGTGAGTAAAGGGCCCAATGGGTGTTTACTCTGGTTTAGTGATCTGGTTGACATAAGAAAATTGACCGATGTTGATGAAGATGTATACGTAAGGGTGGCTAGTTCAGAATTAGAGGCTACTAAAGGAAAGCAATTACATAAACCCAACATCCGGAAGCAAGAGAGTGTTTTCATAAGTTGTGTGTTGTTTATTGGAATTTTAGTACTATGTTTAACCTTCATCCTTTATAAACGGTTGAAGACATGGCAGAAAGGAAAGATGGAAGGTAATCTAGAACCAGACGTGAGTGTAATAAATGATCACGAGAGTAAAGATCTAGAGTTACCCATGTTTGAGTTGTCTACAATTACTTCTGCAACCAACAACTTTTCACCTGACAACAAACTTGGAGAAGGTGGCTTTGGATCAGTTTATAAGGGAATCCTGGCCGATGGAGGAGAAATAGCAGTGAAGAGGCTCTCTATGAATTCCAAACAAGGACTTCCAGAGTTCAAAAATGAAGTTATGCATATTGCAAAGCTTCAGCACAGGAATTTAGTGAGGCTACTAGGGTACTGCCTTCAAGCAGGAGAAAGATTGCTTGTTTATGAATTTATGCCCAACAAAAGCTTGGATTCCTTCATATTTGATGAAAACAAGAGCATGTTACTAGATTGGCCCAGGAGAATGCTGATTATCAACGGGGTTGCACGGGGTCTTCTTTATCTTCATCAAGATTCAAGGCATAGAATAGTTCATAGAGATCTCAAAGCGGGTAATGTTTTGTTAGATAGTGAAATGAACCCAAAAATCTCAGACTTTGGACTGGCTAGAAGCTTTGGAGGAAATGAAATCGAAGCAACCACAAAACATGTAGTTGGAACCTATGGCTATCTTCCTCCAGAGTACATAATCGATGGAGCTTATTCAACAAAGTCAGATGTTTTCAGCTTTGGTGTGCTGATATTGGAGATAGTGAGTGGGAAGAGAAATAAAGGGTTCTGTCATCAAGATAATCTTCTGGCACATGTATGGAAACTGTTTACTGAAGGGAAATGTTCTGAAATAGTTGATGCAGCAATAACAGAGTCAGTTCATTTGTTTGAAGCTCTAAGAACAATTCATGTGGGACTACTGTGTGTGCAACTAAATCCTGAAGACAGGCCAAACATGTCATCTGTGGTTATGATGTTGACCAGTGAATCTGCACTGCCTCAGCCAAACTTGCCTGGATTCTTTACAAGTACAAGCATGGCTGGTGATAGTTCATCATCAAGCAGTCATAAACAATACACAAATAATGACTTGTCACTTAGCATAATGTCTGCTAGATACCTTGCCATGCTGAAAAGTACAGCAGCCGCTACTCTGAGAGACACTATTGATACAGTGCAAACTATCAGTGACGGCGAGATCATAGTTTCAGCTGGAAAAGTCTTTTCATTAGGATTCTTCAGTCCAGGCAATTCAAAAAACCGTTATGTTGGAATTTGGTACTACAGAATCCCAATACAGACTGTAGTATGGGTTGCCAACAGAAACAACCCTCTTACTGACTCATCAGGGGTTTTGAAGCTCAATGAAACTGGACTTCTAGTTCTTCTCAACCATAACAAGAGTGTTATGATTGGCAATTACTGCACTGCAGGAAAAATGAAAAGCCATCTAGAAAGAGATGCAACTGTAATAAATGAGCACGGGAAGGAAGATGGAGAGTTACCAATGTTTGATTTGTCAACAATTAGGTCTGCGACAAATGGCTTTTCACTTAACAACAAACTAGGTGAAGGTGGTTTTGGACCTGTTTATAAGGGCATCCTGGACGATGGAAGAGAAATTGCTGTCAAGAGAGACTCAAAGAACTCAAGCCAGGGACTTCAGGAGTTCAAAAATGAAGTTATGCACATTGCAAAACTTCAGCATAGGAATTTAGTGAGGCTACTGGGCTACTGCATTCAATCAGGAGAAAGATTGCTTGTTTATGAATTCATGGCAAACAAAAGCTTGGATTCCATACTATTTGATGAGAAGAAGAGCCTATTACTAGATTGGCCAAGGCGCTTGCTCATTATCAATGGGATTGGTCGGGGGCTTCTGTATCTTCATGAAGATTCAAGGCATAGAATAGTTCACAGAGATCTCAAAGCTGGGAATGTTTTGTTAGATTGTGAAATGAACCCCAAAATCTCGGACTTTGGACTTGCCAGAAGCTTTCTAGGAAATGAAACTGAAGCAAACACAAAGCGTGTAGTTGGAACCTATGGCTATATGTCGCCAGAGTATATAATTGATGGAGCTTATTCAACAAAATCGGATGTTTTCAGCTTTGGTGTGTTGATACTGGAGATAGTGAGTGGTAAGAGAAATAGAGGATTTGGTCATCAAGATAATCTTCTGGCTCATGCATGGAGACTATTTACTGAAGGCAAATGCACTGAAATAGTTGATGCAACAATAAGAGACTCGGTCAATTTATCTTCAGCTGTGAGATTAATTCATGTGGGGCTACTTTGTGTGCAACTAAGTCCAGATGACAGGCCAAACATGTCCTCTGTGGTTCTGATGCTGAGCACTGAGTCTACGTTGCCTCAGCCAAAATTGCCTGGACTTTTTACAGATAGGAACCTGGTTGAGGACAGTTCTTCATCAAGCACTCATAAGCAATACTCAAATAATGACATGACAGTTAGCATAATGTCTGCTCGATAG 3834 0.4087 MERVVTLLLFCVALLNSVAATSVRESINVLQSISDGQVIVSPGKIYALGFFSPPQSKNRYVGIWYNEIPTQTVVWVANRDNPLHDSSGVLKLDETGVLVLLRHNKSVIWSSNTTGSARHPVVAKLLDTGNLIVQNGNGNDEAKDLLWQSFDYPVDTLLPGQKFGRNIVTGLNRYLSSWNSSEDPSHGVYSYQLDITGYPQFILREGTTKTYRFGSWNGVQFSGAPLLKQSDYTRFSFISNEEELYFMFEHTNKSFLHRMVLTPEGHIQGTFWDNVRKHWSLHARIPVDDCDYYGKCGAYATCNIDKIPPCQCLDGFVPKTADLYGGCVRRTSLSCHEDGFLQVSGLKLPDTEKSWFSRNMSLEDCKILCRKNCSCKAYAALDVSKGPNGCLLWFSDLVDIRKLTDVDEDVYVRVASSELEATKGKQLHKPNIRKQESVFISCVLFIGILVLCLTFILYKRLKTWQKGKMEGNLEPDVSVINDHESKDLELPMFELSTITSATNNFSPDNKLGEGGFGSVYKGILADGGEIAVKRLSMNSKQGLPEFKNEVMHIAKLQHRNLVRLLGYCLQAGERLLVYEFMPNKSLDSFIFDENKSMLLDWPRRMLIINGVARGLLYLHQDSRHRIVHRDLKAGNVLLDSEMNPKISDFGLARSFGGNEIEATTKHVVGTYGYLPPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNKGFCHQDNLLAHVWKLFTEGKCSEIVDAAITESVHLFEALRTIHVGLLCVQLNPEDRPNMSSVVMMLTSESALPQPNLPGFFTSTSMAGDSSSSSSHKQYTNNDLSLSIMSARYLAMLKSTAAATLRDTIDTVQTISDGEIIVSAGKVFSLGFFSPGNSKNRYVGIWYYRIPIQTVVWVANRNNPLTDSSGVLKLNETGLLVLLNHNKSVMIGNYCTAGKMKSHLERDATVINEHGKEDGELPMFDLSTIRSATNGFSLNNKLGEGGFGPVYKGILDDGREIAVKRDSKNSSQGLQEFKNEVMHIAKLQHRNLVRLLGYCIQSGERLLVYEFMANKSLDSILFDEKKSLLLDWPRRLLIINGIGRGLLYLHEDSRHRIVHRDLKAGNVLLDCEMNPKISDFGLARSFLGNETEANTKRVVGTYGYMSPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNRGFGHQDNLLAHAWRLFTEGKCTEIVDATIRDSVNLSSAVRLIHVGLLCVQLSPDDRPNMSSVVLMLSTESTLPQPKLPGLFTDRNLVEDSSSSSTHKQYSNNDMTVSIMSAR 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02727 1277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1084 1096 IPR008271 GO:0004672|GO:0006468
Viun5g02727 1277 Pfam Protein tyrosine and serine/threonine kinase 508 772 IPR001245 GO:0004672|GO:0006468
Viun5g02727 1277 Pfam Protein tyrosine and serine/threonine kinase 964 1229 IPR001245 GO:0004672|GO:0006468
Viun5g02727 1277 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 120 797 - -
Viun5g02727 1277 Gene3D Hepatocyte Growth Factor 333 414 - -
Viun5g02727 1277 SMART ntp_6 335 414 IPR003609 -
Viun5g02727 1277 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 781 - -
Viun5g02727 1277 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 580 - -
Viun5g02727 1277 Gene3D Phosphorylase Kinase; domain 1 938 1038 - -
Viun5g02727 1277 Gene3D Phosphorylase Kinase; domain 1 479 580 - -
Viun5g02727 1277 Pfam D-mannose binding lectin 72 178 IPR001480 -
Viun5g02727 1277 Pfam D-mannose binding lectin 881 919 IPR001480 -
Viun5g02727 1277 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Viun5g02727 1277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Viun5g02727 1277 ProSiteProfiles Bulb-type lectin domain profile. 833 963 IPR001480 -
Viun5g02727 1277 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1039 1239 - -
Viun5g02727 1277 ProSiteProfiles Protein kinase domain profile. 963 1242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02727 1277 SUPERFAMILY Protein kinase-like (PK-like) 946 1246 IPR011009 -
Viun5g02727 1277 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Viun5g02727 1277 Pfam Domain of unknown function (DUF3403) 774 819 IPR021820 GO:0004674
Viun5g02727 1277 Pfam Domain of unknown function (DUF3403) 1232 1277 IPR021820 GO:0004674
Viun5g02727 1277 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Viun5g02727 1277 CDD B_lectin 839 916 IPR001480 -
Viun5g02727 1277 SMART blect_4 30 153 IPR001480 -
Viun5g02727 1277 SMART blect_4 839 957 IPR001480 -
Viun5g02727 1277 Gene3D - 19 150 IPR036426 -
Viun5g02727 1277 Gene3D - 828 937 IPR036426 -
Viun5g02727 1277 CDD B_lectin 31 153 IPR001480 -
Viun5g02727 1277 Pfam PAN-like domain 335 400 IPR003609 -
Viun5g02727 1277 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 926 1038 - -
Viun5g02727 1277 SUPERFAMILY alpha-D-mannose-specific plant lectins 865 915 IPR036426 -
Viun5g02727 1277 SMART serkin_6 963 1233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02727 1277 SMART serkin_6 505 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02727 1277 CDD STKc_IRAK 511 774 - -
Viun5g02727 1277 CDD STKc_IRAK 969 1231 - -
Viun5g02727 1277 Gene3D Transferase(Phosphotransferase) domain 1 581 781 - -
Viun5g02727 1277 Gene3D Transferase(Phosphotransferase) domain 1 1039 1239 - -
Viun5g02727 1277 SUPERFAMILY Protein kinase-like (PK-like) 489 797 IPR011009 -
Viun5g02727 1277 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Viun5g02727 1277 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 150 - -
Viun5g02727 1277 ProSiteProfiles PAN/Apple domain profile. 335 415 IPR003609 -
Viun5g02727 1277 CDD PAN_AP_plant 331 415 - -
Viun5g02727 1277 ProSiteProfiles Protein kinase domain profile. 505 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02727 Viun-Chr5 38803468 38812232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02727 438 807 Receptor kinase-like Gene Family AT4G23190 50.000 3.98e-116 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g02727 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02727 - - vun:114184694 2549.24