Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02726 ATGGAAAGCTTAAAGGCTATGGTTTTGTGGTCTCTTCTGTTGCATTTCATACCAGGTTTGAGCAGCCTTGAAACCATTGCTCCAGGCCAATCAGTGAAGGATAATGAGACTCTGGTTTCAGCAGAAGGGACTTTTGAAGCAGGGTTCTTCAACTTTGGGGATCAAAGTAGCCAATATTTTGGTATATGGTACAAGGATATTTCTCCAAGAACAGTTGTGTGGATAGCAAATAGAGATACCCCAGTTCAAAACTCCTCAGGAGTTTTCAATGTAACTCATGTGGGAAATCTTTTCATTTTTAATGGTTCAGGGGCCATAATCTGGTCTTCCAATACATCAACAGCTGCAAACAATCCTGTTGTGCAGCTTTTGGAGACTGGAAATCTTGTTGTGAGAGAAGAAAGCAATCTTCTATGGCAGAGTTTTGATCTTCCTGGGGACACTTTGTTGCCAGGGATGAGACTTCGAAGTAGCATGGTAAATGGTAGTTTTACATCTCTGACATCTTGGAGAGACACAGAAGATCCTGGTAGAGGTGTGTATTCATATCACATAGATACTCGTGGTTTTCCTCAAGTTGTGATTACCAAGGGAGGGTCATTGTTGTATAGACCAGGTTCATGGAATGGCAATATTTTATCTGGGATTGCTTCTGCAACATTGTACAAAAACTTTAATTTCTCTTTTGTTATAACTGAGAAGGAAGTGTCTTATGGATATGAACTACTGAACAAGTCAATTGTTTCGAGGTACATGATCACGTTAACAGGTCAAATACAACGTTTTGTTTTGTCTGATTTGACAAATAGTTGGCAGCTTTTCTACTCAGGCCCTGCAGACCAGTGTGATAACTATGCCGTTTGTGGAGTGAATGCTAATTGTGATGTAAATAGCTCTCCAACGTGTGAGTGCCTTCAGGGTTTCATTCCCAGATCCGAAGAAAAATGGAATGCACAAAACTGGTCAGATGGGTGTGTTAGGAGAGTTAATTTAGATTGTGGCCACAGTGATGGCTTTCTGATGTATCAGGGAATGAAGTTGCCGGACACATCAACCTCATGGTTTGACAGAAGCATGAACCTTGAGGAATGTAAGAATTTCTGTCTGCAAAACTGCTCCTGCACAGCATATGCAAATTTAGATATCAGAAATGGTGGAAGTGGATGCTTGCTTTGGTTTAATAACATGGTGGATTTGAGAAAACTAACCACTGGAGGACAAGATCTTTTCATAAGAGTGGCAGCTTCAGATCTAGGTCATGAAAAAGGCTTACGCAAGAAGCAGCTTGCAGGAATTGTTGCAGGTTGTGCAGTGTTTATTGTGGTCTTGATATTATTGGGAGTGACCATGCTTCGGAGAAAAAAGCTTGAGAAGCCAGGAAACAACAAAATAGTTAGCTGGAAGAATCACACTGTTAAGACACAGAAGGAAGACATTGACATTCCAATATTTAATTTTTCAACCATAGCTAATGCAACTAATGACTTTTGCATTACTAACATATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTACTTTGGCAAATGGCCAAGACATAGCTGTGAAGCGGCTTTGCAATAATTCAGGACAAGGACCAAAAGAGTTCATAAACGAAGTTGTGCTAATTGCTAATCTTCAGCACCGGAACCTTGTGAAGCTTCTTGGGTGTTGCATTCAAGATGATGAGAGGATATTGATATATGAATTCATGACTAACAAAAGCTTGAACTACTTTATTTTTGATGAATCTAGAAAAGGGTTGCTAGATTGGTCTCAGCGCTTTCAAATTATTCGTGGAATTGCAAGAGGGCTTCTCTATCTTCATGAAGATTCTAGATTAAGAATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTAGATGAAAACATGAATCCAAAAATATCAGACTTTGGGCTGGCTACAGCATTTGGAGGAGATGAAGTTGAAGGCCAAACAAAGAGAATAGTGGGAACTTATGGTTATATTTCTCCAGAATATGCAGCCCGTGGGAATTTCTCAGTGAAATCTGATGTCTACAGTTTTGGTGTTATATTACTAGAGATTGTTTGTGGAAAAAAGAATAGAGAATATTTTGACGATCATGATCATGACCTTCTTGGACATGCATGGAGACTTTGGTGTGAAGAAAAACCAATGGAGTTGATAGATGAATCACTAGGCGAATCAGTAGCTCTAGCTGAAGCTGATGTATTGAGATGTATTCACATTGGGCTTCTATGTGTACAAGACAGAGCAGAGGATAGACCAGAAATGTCATTAATAGTTCTTATGCTGAATGGTGAGAAACCATTGCCTAGGCCAAGGGAACCTGCTTTTTATCCCCATCAATCTGGCTCTTCATCAGGAAATAGTAAACTTCAATCAAACAATGAGATTTCTATGTCATTGTTGGAGGCAAGATAG 2433 0.397 MESLKAMVLWSLLLHFIPGLSSLETIAPGQSVKDNETLVSAEGTFEAGFFNFGDQSSQYFGIWYKDISPRTVVWIANRDTPVQNSSGVFNVTHVGNLFIFNGSGAIIWSSNTSTAANNPVVQLLETGNLVVREESNLLWQSFDLPGDTLLPGMRLRSSMVNGSFTSLTSWRDTEDPGRGVYSYHIDTRGFPQVVITKGGSLLYRPGSWNGNILSGIASATLYKNFNFSFVITEKEVSYGYELLNKSIVSRYMITLTGQIQRFVLSDLTNSWQLFYSGPADQCDNYAVCGVNANCDVNSSPTCECLQGFIPRSEEKWNAQNWSDGCVRRVNLDCGHSDGFLMYQGMKLPDTSTSWFDRSMNLEECKNFCLQNCSCTAYANLDIRNGGSGCLLWFNNMVDLRKLTTGGQDLFIRVAASDLGHEKGLRKKQLAGIVAGCAVFIVVLILLGVTMLRRKKLEKPGNNKIVSWKNHTVKTQKEDIDIPIFNFSTIANATNDFCITNILGEGGFGPVYKGTLANGQDIAVKRLCNNSGQGPKEFINEVVLIANLQHRNLVKLLGCCIQDDERILIYEFMTNKSLNYFIFDESRKGLLDWSQRFQIIRGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLATAFGGDEVEGQTKRIVGTYGYISPEYAARGNFSVKSDVYSFGVILLEIVCGKKNREYFDDHDHDLLGHAWRLWCEEKPMELIDESLGESVALAEADVLRCIHIGLLCVQDRAEDRPEMSLIVLMLNGEKPLPRPREPAFYPHQSGSSSGNSKLQSNNEISMSLLEAR 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02726 810 CDD STKc_IRAK 502 770 - -
Viun5g02726 810 Gene3D Hepatocyte Growth Factor 330 411 - -
Viun5g02726 810 Pfam D-mannose binding lectin 71 171 IPR001480 -
Viun5g02726 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Viun5g02726 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 332 413 - -
Viun5g02726 810 SUPERFAMILY Protein kinase-like (PK-like) 481 791 IPR011009 -
Viun5g02726 810 Gene3D Transferase(Phosphotransferase) domain 1 572 774 - -
Viun5g02726 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 461 571 - -
Viun5g02726 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Viun5g02726 810 CDD B_lectin 30 145 IPR001480 -
Viun5g02726 810 ProSiteProfiles Protein kinase domain profile. 496 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02726 810 Pfam PAN-like domain 333 399 IPR003609 -
Viun5g02726 810 MobiDBLite consensus disorder prediction 784 798 - -
Viun5g02726 810 SMART serkin_6 496 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02726 810 MobiDBLite consensus disorder prediction 777 798 - -
Viun5g02726 810 ProSiteProfiles PAN/Apple domain profile. 333 414 IPR003609 -
Viun5g02726 810 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 758 - -
Viun5g02726 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 142 - -
Viun5g02726 810 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Viun5g02726 810 Gene3D - 21 142 IPR036426 -
Viun5g02726 810 SMART ntp_6 334 413 IPR003609 -
Viun5g02726 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 210 IPR036426 -
Viun5g02726 810 CDD PAN_AP_plant 329 414 - -
Viun5g02726 810 Pfam S-locus glycoprotein domain 203 311 IPR000858 GO:0048544
Viun5g02726 810 SMART blect_4 29 145 IPR001480 -
Viun5g02726 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 572 775 - -
Viun5g02726 810 Gene3D Phosphorylase Kinase; domain 1 469 571 - -
Viun5g02726 810 Pfam Protein kinase domain 500 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02726 Viun-Chr5 38798825 38802416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02726 422 785 Receptor kinase-like Gene Family AT4G23190 50.943 2.17e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g02726 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02726 - - ccaj:109805721 1363.98