Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02718 ATGAGAATGGAATTTCGCATTCTCAGCGGACTTGACTGGCGAATGCGATCTATAACTCCCTTTCACTTCCTGGATCACTATTATCCCACCTTCAAAAGAATCGGGGGTTTTAAACGCCGATGCATTAATGAGATCATAGTCCAGTCTCAAGGAGAGGTCTACTTCGCTCAATTCAAACCTTCTGAGATTGCAATGTCCGCTTTACTGGCTGCTACTTACCTTGGATATTCCTCAGAATTTACCTCAATTGAGAGATCACTTCGCATTTCGGAGGATCTTAAGGCCTGTTATCAAGAGATGGTTGATCTTTGTCGTAAAAGGAGAATCAACATACGTAGCACTACTGGAGAAGTTATCTTTTCTATTATTCCCTCCTCATCGGTAGAAGCTTCAGGATCACAAGCAGCTGAATTACAAGTACAAAGACAAAGCGAGAGCTCGACGACCCAGTTTTTGAACATGGTGTTGGATAATGATGATGAAGAAGAAGACGACGAAAATGTAGCACTGTTAAACCGCCGAAAACGGAATACGAGCGAGGAAGCGGTGGAGGCACCTAAAGAAGTTGCAGAAGGCAAGAGCGAGGCACAGAAACTAGGAGAGGTGAAGCAAAAGGCAACGAGTGTAGCAGGTATACGTATATCTGAAGAGAAAGAAGTAGAAGCTGGGTGTGGAGCAAGACAGGACAAGGGCGAAGAGAAATCTGAAAAAATGGTAGAAAGTGGGAGCGGAACAAGAGATGAGGAGTCCAAGGGGCCATGTGAAGAAACGGTAGGAGCTGAGAGCAGCGGAGCAGAAGAGGACAGGGGCAAGGCTGTAGATGAAATGTCTGAAAGCGAGAATGAGCTGCGAAAAAGACAGATAAAAGGCAAGGGCAAGGCTGTAGAGGAGGCACCTAAAGAAGTTGCAGAGGCAAGGAAACAGGGAGATGTAGCGACAGGAGCAGGTATACGTATATCTGAAGAGAAAGAAGTAGAAAGTGGGAGCGGAACAAGAAATGACGTGTCGAAAGTGCTATGTAAAGAAATAGTAGGAGGTGAGAGCAGCAGAGCAAGAGAGGACAAGGCTATAGATGAAATGTTTGAAAGAAACAGACAGATAAGAGGCAAGAGCAAGGCTGCACTTGAAATGTTGAGGTCAAAGACAGGTCTAGAGGATGCACCATTCAGGGCAATGAACTTTAAGGTGAAGTGGCCTGTTATTGTGCAGCCAGGTGAGAACGTTGACAATATAGATCCGAGCCTATATATAGATGAATCCAGCATTACAACCGCTCGATCTCCTACAACGATAAGAGGGAGCGGCAACGTTCTACCTATAGTTTCCAATCCTTGTCAGTGCACTATCTTGTAG 1353 0.4523 MRMEFRILSGLDWRMRSITPFHFLDHYYPTFKRIGGFKRRCINEIIVQSQGEVYFAQFKPSEIAMSALLAATYLGYSSEFTSIERSLRISEDLKACYQEMVDLCRKRRINIRSTTGEVIFSIIPSSSVEASGSQAAELQVQRQSESSTTQFLNMVLDNDDEEEDDENVALLNRRKRNTSEEAVEAPKEVAEGKSEAQKLGEVKQKATSVAGIRISEEKEVEAGCGARQDKGEEKSEKMVESGSGTRDEESKGPCEETVGAESSGAEEDRGKAVDEMSESENELRKRQIKGKGKAVEEAPKEVAEARKQGDVATGAGIRISEEKEVESGSGTRNDVSKVLCKEIVGGESSRAREDKAIDEMFERNRQIRGKSKAALEMLRSKTGLEDAPFRAMNFKVKWPVIVQPGENVDNIDPSLYIDESSITTARSPTTIRGSGNVLPIVSNPCQCTIL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02718 450 Gene3D - 1 115 - -
Viun5g02718 450 MobiDBLite consensus disorder prediction 218 255 - -
Viun5g02718 450 CDD CYCLIN_AtCycD-like_rpt2 18 100 - -
Viun5g02718 450 SMART Cyclin_C_2 18 136 IPR004367 -
Viun5g02718 450 MobiDBLite consensus disorder prediction 262 307 - -
Viun5g02718 450 MobiDBLite consensus disorder prediction 172 200 - -
Viun5g02718 450 SUPERFAMILY Cyclin-like 2 108 IPR036915 -
Viun5g02718 450 Pfam Cyclin, C-terminal domain 18 109 IPR004367 -
Viun5g02718 450 MobiDBLite consensus disorder prediction 218 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02718 Viun-Chr5 38635655 38637438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02718 2 71 Core Cell Cycle Gene Families AT1G70210 39.189 1.55e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02718 - K18812 vun:114183617 842.802