Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02706 ATGATGTTATCAGCTACAATGTCTGCTCTATCGAGGAGCTCGCTGGAGGAGATGCTTGAGTCGCTTCGCAAGAGAGACGAGGAGGAGAGGCCGAAGGACTTGCCGCCGGCATTGCCGTCGCGGCCGCAGTCGAGGGCGCGGATGCCTCCGGCGAGGAGGTCGTTGCCTAATAGCTTCAAGGTTGATGGCGATAATGATGACAAGGGGCACAAAAGGAAGGGTAGTTTTGGGTCCAAGAAGGTCAAGTTGCGTGCGGAATCCCCTTATGCAGTCATAGCAGAAGAGAAAGTGAGTAAAAAACCATCGCCGTCTCCGGTTCCAACTGCGAAGGATTCTTCTACTGATTGTGAAGCTCCTCCTCAGTCCGAGGAGTTGGAGGATGATAACGTTGCTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAGAGGGATGTGGGAGCTGGGAACGATACAGTCAACTTTTGGAGAGGAAGCATCTGTTTCTCTCTCAAATGGAAATGTTATGAAAGTAGCCAGGTCAGATCTCCTACCAGCCAATCCTGATATTTTAGAGGGTATTGAAGATCTTATACAGCTCAGTTATTTAAATGAGCCTTCAGTTCTTCACAATCTTCATTCTAGATATGCTCAGGATATGATTTATAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCTTTCAAAAAAGTCGAAGTTTATGGAAATGATTATGTTCTAGCTTATAGGCAGAAACTTACCGATAGTCCTCATGTTTATGCTATGACAGATGCAGCTTATAATGAGATGATGACAGATGAAGTAAATCAGTCTATTATCATAAGTGGTGAAAGTGGAGCTGGGAAAACAGAGACCGCCAAAGTTGCTATGCAATACTTAGCTGCTCTTGGCGGTGGCTGTTCAGGAATAGAAAATGAAATCCTTCAGACAAATTTTATTCTAGAGGCTTTTGGGAATGCAAAAACATCTAGGAATGATAACTCTAGCAGATTTGGGAAATTGATTGAAATTCATTTCAGCGCAATGGGGAAAATTTGTGGTGCAAAAGTTCAAACTTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTTACCTTGGGCGAGAGGTCATATCACATATTTTATCAACTTTGTGCGGGATCTTCATCCAAACTAAAAGAAAGACTGAATCTTAGGACGGCTAGCGAATATAAATATCTTAAGCAAAGTGACTGCACAACAATTGATGGTGTTGATGATGCTAAAAATTTTAAAAGGCTGATGAAAGCATTGGATGTTATTCGAATGTCCAAAGAAGATCAAGAGCTAGTTTTTAAGATGGTGGCTGCGATATTATGGTTGGGAAATATATCATTCCAAGATACTGATAATGAAAGTCACATTGAGGTGGTGAATGATGAAGCTGTAACAAATGCTTCTGTGCTAATGGGGTGCAGTTCTCAAGAGTTAATGGCAGTGTTATCTACCCACAAAATCCAAGCTGGCAAGGATACAATTACCAAGAAATTGACCTCGCGGCAGGCAATTGATGCAAGAGATGCAATAGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTCTTGAACAAGTTAACAAGTCACTTCAAGTAGGTAAACGGTGTACTGGGAGATCCATAAGTATCCTTGATATTTATGGATTTGAGTCATTCCAGAATAACAGCTTTGAACAATTTTGTATAAACTACGCCAATGAGAGGCTTCAACAACACTTCAATCGACATCTGTTTAAACTTGAGCAGGAGGACTATGAATTAGATGGTATTGATTGGACCAAAGTAGAGTTTGAGGACAACCAAGTGTGTTTGGATCTCTTTGAAAAGAAGCCTCTTGGGCTATTCTCTCTGTTGGACGAGGAATCGAATTTCCCCAAGGCCACTGATCTAACACTAGCCAACAAACTTAAGCAACACCTGCACGCTAATCCTTGCTTTAAAGGGGATAGAGGCAAGGCTTTTAGTGTCTCTCATTATGCTGGGGAGGTTTTGTATGATACAGGTGGCTTCCTAGAAAAGAATAGAGATCCACTACCATCTGTTTCCATTCAACTACTGTCATCATGTAGCTGTGAACTGCTTCAGTTGTTCTGCAAGAAGCTTAATCAGCCTCAGAAGCAATCAAATTCCTCGCATGGAGGTGCTCAGGACTCACAAAAGCAGAGTGTTGGCACTAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAGCTGGAGAGCACCACACCTCACTTTATTCGCTGTATAAAGCCAAATACTAAGCAACTTCCTGGAATGTATGAACAAGATCTTGTACTACAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTTAGGATTTCGAGGGCTGGATATCCTACTCGAATGACACATCAAGAATTTGCCAAAAGGTATGGGTTTCTGCTTTTTGAGGCAAACACATCTCTGGACCCATTGAGCATTTCGGTTGCGGTTTTGCAACAGTTTAATATCCCTCCCGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACTGGGCAGATTGGGGCACTGGAGGACAGGAGAAAATATCTTTTGCAGGGACTACTTGGTATTCAAAAAACCTTTCGTGGTTATCGAGCTCGCTGTCATTACAATGAGCTGAAGAAGGGAGTGACTGCTTTACAATCATTTGTTCGGGGAGAAATGGGAAGAAGGGAATATGGTGTTATGGTGAAGTCTTCTTTGACTATTTCTTCTAAAAATTTGAAGGAGATGCAGGCAGCCACAATACTACAATCTGTAATTCGTGGATGGCTGGTTCGGAGGAAAGCCAGTAACTTCAATAAGCCAAAGAAAAGTCGTGAAAATGCAAGAACTAGGCGAAGGTCACGTGTGAAGATGCCCGAAGAAAAGGATGTGTCAAGTGATCAGATCCGGAATCTACCTTCAGCTTTAGCTGAACTCCAAAGGCGGGTTCTCAAGGCCGAAGCTACCATAGAGCAAAAGGAAGGGGAAAATGCTGAATTGAAGGATCAGCTAAATCAGTTCGAGAATAGATGGATTCAATACGAGAAAAGGATGAAAACAATGGAGGATATGTGGCAAAAACAAATGGCATCTTTGCAAACGAACCTTGCTACTGCTAGAAAGAGCCTTGCTTCTGAGAATGCCAACAATCAACATGGTGCAAGACGTGATGTATCATCACCTTTACCCTATGAATCGGAAGATGCTATTTCCATGGGATCTCGAACACCTAGTGCAAGCACACCATTGAAGTACTCTAATAGTATTTCTGAATCTGCACTAGGGAGAGAAGGTCATGGTGCTATGGCTTCAGTGGGCAACCTTGCGAGGGAATTTGATAACCGCAGACAGACCTTTGATTATGATGCCAGAAATCTGGTTGAGGCTAGAGCAGGTCAATCTGCTAACTCAAATTCCGTTGAAGAACTTCGGAAACTCAAACACAGGTTTGAGGTGTGGAAGAAAGACTACAAGGTTAGATTAAAAGAAACAAAAGCAAGACTTCAAAAGGTAGGGAATACAGAAATGGATAAAAGGCGGAAATGGTGGGGGAAACTGAGTTCCAGAACACAACAATAG 3594 0.4213 MMLSATMSALSRSSLEEMLESLRKRDEEERPKDLPPALPSRPQSRARMPPARRSLPNSFKVDGDNDDKGHKRKGSFGSKKVKLRAESPYAVIAEEKVSKKPSPSPVPTAKDSSTDCEAPPQSEELEDDNVAYFIKKKLHVWCRQPRGMWELGTIQSTFGEEASVSLSNGNVMKVARSDLLPANPDILEGIEDLIQLSYLNEPSVLHNLHSRYAQDMIYSKAGPILIALNPFKKVEVYGNDYVLAYRQKLTDSPHVYAMTDAAYNEMMTDEVNQSIIISGESGAGKTETAKVAMQYLAALGGGCSGIENEILQTNFILEAFGNAKTSRNDNSSRFGKLIEIHFSAMGKICGAKVQTFLLEKSRVVQLTLGERSYHIFYQLCAGSSSKLKERLNLRTASEYKYLKQSDCTTIDGVDDAKNFKRLMKALDVIRMSKEDQELVFKMVAAILWLGNISFQDTDNESHIEVVNDEAVTNASVLMGCSSQELMAVLSTHKIQAGKDTITKKLTSRQAIDARDAIAKFIYASLFDWLLEQVNKSLQVGKRCTGRSISILDIYGFESFQNNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTKVEFEDNQVCLDLFEKKPLGLFSLLDEESNFPKATDLTLANKLKQHLHANPCFKGDRGKAFSVSHYAGEVLYDTGGFLEKNRDPLPSVSIQLLSSCSCELLQLFCKKLNQPQKQSNSSHGGAQDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQLPGMYEQDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFAKRYGFLLFEANTSLDPLSISVAVLQQFNIPPEMYQVGFTKLYLRTGQIGALEDRRKYLLQGLLGIQKTFRGYRARCHYNELKKGVTALQSFVRGEMGRREYGVMVKSSLTISSKNLKEMQAATILQSVIRGWLVRRKASNFNKPKKSRENARTRRRSRVKMPEEKDVSSDQIRNLPSALAELQRRVLKAEATIEQKEGENAELKDQLNQFENRWIQYEKRMKTMEDMWQKQMASLQTNLATARKSLASENANNQHGARRDVSSPLPYESEDAISMGSRTPSASTPLKYSNSISESALGREGHGAMASVGNLAREFDNRRQTFDYDARNLVEARAGQSANSNSVEELRKLKHRFEVWKKDYKVRLKETKARLQKVGNTEMDKRRKWWGKLSSRTQQ 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02706 1197 MobiDBLite consensus disorder prediction 1050 1088 - -
Viun5g02706 1197 MobiDBLite consensus disorder prediction 1 15 - -
Viun5g02706 1197 Gene3D - 865 910 - -
Viun5g02706 1197 Gene3D Myosin VI head, motor domain, U50 subdomain 428 536 - -
Viun5g02706 1197 Gene3D - 559 748 - -
Viun5g02706 1197 MobiDBLite consensus disorder prediction 105 119 - -
Viun5g02706 1197 MobiDBLite consensus disorder prediction 1176 1197 - -
Viun5g02706 1197 MobiDBLite consensus disorder prediction 17 35 - -
Viun5g02706 1197 FunFam Myosin heavy chain 371 427 - -
Viun5g02706 1197 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 135 184 IPR004009 GO:0003774|GO:0005524|GO:0016459
Viun5g02706 1197 Coils Coil 981 1029 - -
Viun5g02706 1197 MobiDBLite consensus disorder prediction 59 73 - -
Viun5g02706 1197 SMART iq_5 919 941 IPR000048 GO:0005515
Viun5g02706 1197 SMART iq_5 859 881 IPR000048 GO:0005515
Viun5g02706 1197 SMART iq_5 882 904 IPR000048 GO:0005515
Viun5g02706 1197 MobiDBLite consensus disorder prediction 942 972 - -
Viun5g02706 1197 Pfam Myosin head (motor domain) 191 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun5g02706 1197 PRINTS Myosin heavy chain signature 547 575 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun5g02706 1197 PRINTS Myosin heavy chain signature 315 342 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun5g02706 1197 PRINTS Myosin heavy chain signature 218 237 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun5g02706 1197 PRINTS Myosin heavy chain signature 272 297 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun5g02706 1197 PRINTS Myosin heavy chain signature 600 628 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun5g02706 1197 Coils Coil 1034 1054 - -
Viun5g02706 1197 Gene3D - 792 859 - -
Viun5g02706 1197 MobiDBLite consensus disorder prediction 958 972 - -
Viun5g02706 1197 ProSiteProfiles IQ motif profile. 860 889 IPR000048 GO:0005515
Viun5g02706 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 908 IPR027417 -
Viun5g02706 1197 Gene3D - 371 427 - -
Viun5g02706 1197 ProSiteProfiles Myosin motor domain profile. 188 858 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun5g02706 1197 PANTHER MYOSIN 181 1188 - -
Viun5g02706 1197 Gene3D Kinesin motor domain 187 791 IPR036961 -
Viun5g02706 1197 CDD MYSc_Myo8 202 846 IPR036022 -
Viun5g02706 1197 SMART MYSc_2a 182 859 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun5g02706 1197 FunFam Unconventional myosin-XIX 559 748 - -
Viun5g02706 1197 ProSiteProfiles IQ motif profile. 920 949 IPR000048 GO:0005515
Viun5g02706 1197 MobiDBLite consensus disorder prediction 1 80 - -
Viun5g02706 1197 Pfam IQ calmodulin-binding motif 922 939 IPR000048 GO:0005515
Viun5g02706 1197 Pfam IQ calmodulin-binding motif 867 880 IPR000048 GO:0005515
Viun5g02706 1197 ProSiteProfiles IQ motif profile. 883 912 IPR000048 GO:0005515
Viun5g02706 1197 MobiDBLite consensus disorder prediction 94 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02706 Viun-Chr5 38467686 38478318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02706 1 1190 Myosins gene family AT5G54280 61.588 0.0 1528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02706 K10357 - gmx:100819335 1956.8