Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02675 ATGGATCATCAAGAGATAGCAGACATAGAGTCTCAAAATGTCGATACCCCCCCTGACGTATCCCACAAAGTAAAACGTCAAGTAACTCTTAAGTTTGATGACGTTGTGTACAAAATTAAGACAAAGAAAGGTGGAATATTTACGAAGAAGGGAGAGACAGTTGAAAAAGAGATACTGAAGGGAGTGACAGGTGTTGTTGAACCTGGTGAAATGCTGGCCATGTTAGGTCCTTCTGGGAGTGGAAAAACGACTCTGCTGACAGCATTGGGAGGAAGGCTTGGAGGGAAGCTTCATGGAAGCATAACTTACAATGGTGAAGCTTTCTCAAATGCCATGAAGAGGAACACTGGTTTTGTTACACAAGATGATGTTCTCTACCCCCATTTGACTGTGCTTGAGACCCTGGTCTTTACTGCACTTCTCAGATTGCCCAACAGTGTCACCAAGGAAAAGAAAGTTGAGCATGCAAAAGGGGTGATAGATCAACTTGGTTTAACAAGGTGCAAGGATAGCATAGTTGGAAGCCCTTACTTGAGGGGGGTTTCTGGGGGAGAGAGAAAGAGGGTTAGCATAGGACAAGAACTACTCATAAATCCAAGCTTGTTGTTTCTTGATGAACCTACTTCTGGCCTAGACTCAACCACAGCACAAAGAATTGTCTCAACCTTATGGGAGCTAGCATGTGGGGGTAGAACTGTTGTTATGACAATTCACCAACCTTCAAGTAGGTTATACTACATGTTTCATAAGGTGTTACTGCTATCTGAAGGGAACACATTCTACTTTGGAAAGGGATCTGAAGCCATAGAATATTTTTCTAATATGGGATATGCCCCATCTGTGGCCATGAACCCCTCAGATTTCCTTTTGGATCTTGCAAACGGTATCTACACTGATGAATTTAATGCGGATCATGTTGTGGATAAACAGAAATTGATTTCGGTATATAAGGGAAACTGTGCTGCACAATCGAAGCCAGCACTTAAGGGAATCGATGACTCTGGCAAAGACCAGAATAGATTTCAAGAAGAGGGCTCTGGAAAATGGCCTACCAACTGGGGACAACAATTCCTCGTACTATTAAGAAGAGACATAAAAGAGAGAAGGCATGAATCATTTTCTCTTTTGCGTGTTTGTCAGGTCCTTGTGGTTGCTCTAATTTCAGGACTTCTCTGGTTCAAGTCTGATATCTCACATTTGCAGGATCAGATTGGGCTTCTGTTCTTCATATCTGGCTTTTGGGGTTTCTTCCCTCTCTTTCAAGCAATATTCACCTTTCCTCAAGAGCTAATGATGCTACAGAAAGAAAGATCTTCTGGAATGTATAGACTTTCCTCATATTTCATGTCAAGGGTGGTAGCAGATCTTCCTATGGAACTTGTTCTTCCTACCATATTCCTTATCATAACCTATTGGATGGCAGGGTTGAAGGCCAATGTGGTGAACTTCATGTGCACATTGCTCTCTCTCTTACTAAATGTGTTAGTAGCACAAGGTCTAGGCCTTGCCCTTGGTGCTTCTGTGATGGATCAAAAAGCTGCAACAACACTTGCCTCAGTGATCATGCTATGCTTTTTGCTGGCTGGTGGGTTTTATGTTCAGCATGTTCCAAAGTTTATAGCATGGATAAAGTACATTTCTATCAGCTACTACACCTACCAGCTCTTCATTGGGTCTCAATATAGGTATGGTGAGACATACCCTTGTTCCAGTGGGCAGTGTCCTATTGTGGAGTTTCCTTCTATAAAGCAAATAGGGGTTCATTTTGGATTGCATGACCAACTCATGGCTGCATTAGGTCTGGTGATAATGCTCATAGTTTACAGAGTTATAGCCTATGTTGCCCTTATGAGAATTGGAGTCACCAAGAACTAG 1875 0.4235 MDHQEIADIESQNVDTPPDVSHKVKRQVTLKFDDVVYKIKTKKGGIFTKKGETVEKEILKGVTGVVEPGEMLAMLGPSGSGKTTLLTALGGRLGGKLHGSITYNGEAFSNAMKRNTGFVTQDDVLYPHLTVLETLVFTALLRLPNSVTKEKKVEHAKGVIDQLGLTRCKDSIVGSPYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELACGGRTVVMTIHQPSSRLYYMFHKVLLLSEGNTFYFGKGSEAIEYFSNMGYAPSVAMNPSDFLLDLANGIYTDEFNADHVVDKQKLISVYKGNCAAQSKPALKGIDDSGKDQNRFQEEGSGKWPTNWGQQFLVLLRRDIKERRHESFSLLRVCQVLVVALISGLLWFKSDISHLQDQIGLLFFISGFWGFFPLFQAIFTFPQELMMLQKERSSGMYRLSSYFMSRVVADLPMELVLPTIFLIITYWMAGLKANVVNFMCTLLSLLLNVLVAQGLGLALGASVMDQKAATTLASVIMLCFLLAGGFYVQHVPKFIAWIKYISISYYTYQLFIGSQYRYGETYPCSSGQCPIVEFPSIKQIGVHFGLHDQLMAALGLVIMLIVYRVIAYVALMRIGVTKN 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02675 624 MobiDBLite consensus disorder prediction 1 21 - -
Viun5g02675 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 275 IPR027417 -
Viun5g02675 624 FunFam ABC transporter G family member 22 46 275 - -
Viun5g02675 624 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524|GO:0016887
Viun5g02675 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 281 IPR003439 GO:0005524
Viun5g02675 624 SMART AAA_5 68 258 IPR003593 GO:0016887
Viun5g02675 624 Gene3D - 46 276 IPR027417 -
Viun5g02675 624 CDD ABCG_EPDR 28 263 - -
Viun5g02675 624 Pfam ABC-2 type transporter 238 304 IPR043926 GO:0140359
Viun5g02675 624 Pfam ABC transporter 59 209 IPR003439 GO:0005524
Viun5g02675 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 613 - -
Viun5g02675 624 Pfam ABC-2 type transporter 355 561 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02675 Viun-Chr5 38093038 38095657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02675 57 295 Calmodulin-binding Proteins AT2G36910 26.316 5.85e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02675 K05681 - gmx:100816135 1000.35