Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02589 ATGACCACCAGAGAAATCCTTAACAAGATGAAGGTAAAAGTTGGTTTGGGTTCATCAGACACTGATTCAGGGAAAGGCAAGAGCAAGATGTCGAAGAACATAACTCATGGCTTTCACTTGCCTGACTTCTGGAAAGAACCTGCAGATGCTGTCAAGAGAGCTTACAGTAAAACTGATTCTAATATTTTAGAGATGTCGGGTGAATTAGGTAGAGGAGGTTCAACTGCAGTTACAGCCATATTAGTCAATTGTCAGAAGTTAATAGTAGCCAACATTGGGGATTCCAGGGCTGTCTTATGCAAGAAGGGTGTGGCCAAACAATTATCAGTGGATCATGAACCAAACACGGAGCACGAAGATATAAAGAATAGAGGTGGTTTTGTATCAAACTTTCCAGGGGATGTTCCACGGGTTGATGGACGGCTGGCTGTGTCAAGGGCTTTTGGTGACAAAAGCCTGAAGAAACATTTGAGTTCAGAGCCATTTGTGACAGTGGAGAATATAAATGATGATGCAGAGTTCATTATATTAGCCAGTGATGGATTATGGAAGGTCATGTCAAATCAAGAAGCAGTTAATTGTATCAGAAATATAAAGGATGCTCGGTCTTCAGCAAAGCGCCTTACCGAAGAAGCAGTTAACAAGAAAAGCACTGATGATATCTCGTGCATTGTTGTCAAATTTCAGTGA 690 0.413 MTTREILNKMKVKVGLGSSDTDSGKGKSKMSKNITHGFHLPDFWKEPADAVKRAYSKTDSNILEMSGELGRGGSTAVTAILVNCQKLIVANIGDSRAVLCKKGVAKQLSVDHEPNTEHEDIKNRGGFVSNFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPFVTVENINDDAEFIILASDGLWKVMSNQEAVNCIRNIKDARSSAKRLTEEAVNKKSTDDISCIVVKFQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02589 229 Gene3D - 20 229 IPR036457 -
Viun5g02589 229 FunFam Probable protein phosphatase 2C 39 26 229 - -
Viun5g02589 229 CDD PP2Cc 38 228 IPR001932 -
Viun5g02589 229 SMART PP2C_4 7 226 IPR001932 -
Viun5g02589 229 ProSiteProfiles PPM-type phosphatase domain profile. 16 228 IPR001932 -
Viun5g02589 229 Pfam Protein phosphatase 2C 45 221 IPR001932 -
Viun5g02589 229 SUPERFAMILY PP2C-like 37 228 IPR036457 -
Viun5g02589 229 PANTHER PROTEIN PHOSPHATASE 46 228 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02589 Viun-Chr5 37088390 37091658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02589 1 229 PP2C-type Phosphatase Gene Family AT3G15260 59.516 3.84e-114 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02589 K17506 - gmx:100500617 397.897