Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02586 ATGGTGGGCTCAGGAGCATCAGATAGGAGCAAAGAAGCTGTAGGGATGATGGCCCTTCATGAGTCCCTCAAAAGGGTGTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCGAGAGTTCGAGGTGGTAATGGCTGCAAGGTTGGAGATGACAACGGTAGCTTGATGCTGATGTGGGAAGATGGTTTCTGCCGAGGAAGTGTTGATGGAGAGGATCCTGTGAGAAAGGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAACCCAATATCTCCAACTATTGGCAGAGTTCATTTGATGCTCTTCCTCCTGAGTGGACAGACCAGTTTGAGTCAGGCATTCAGACAATAGCTGTAATTCAAGCTGGGCATGGCCTTCTCCAACTTGGTTCTTGCAAGATTATTCCCGAAGACCTTCATTTTGTGCTTAGAATGAGACACACTTTTGAATCCCTTGGCTACCAATCTGGTTTCTACCTCTCCCAGCTCTTCTCTTCAACAAGGAACACTTCTTCTTCCACTTCCGTTCCTTCAAAACCATCCACCATTCCAGTTAGGCCACCTCCACTCTTCAACTGGGGTCAGAGGCCACTTTCTTCTGCCACCTCCATGCTATCTTCACCCAATTTTCAACAACATGCAGCGAGACTTGGGTTCCCTAAAGATGAAACAAACATGTTTCTGATTCCTCACGCATCATCTGAGAGTGCAAGAGTGGAGGACATGATGGGGGAGCATGAAAACGACATAAAATGGCCCAATGGCTTGTCTTTCTTCAATGCTCTCACCGGAAGAACAGATGATGCTAAGCTTCTGTTCAACCCTGATACCTTGGGGAACAAACCAGGTGATCAAACTCAGCATCACCCTCTTTCTCAAAATCCCAATTCAGATGCCTCCAACATGCAGAATGCTAATGCAACCCACCCAAATGAGTTCTTGAGCTTGGATAACAACCAAGATGATGCAAGGAAAATGGACAAGTTCAAGAGAAGCTTCACTCTACCTGCAAGAGTAGCCTCATCATCTTCATCCACTTCAATGGATCATCATCAAACACAAGGTGTGCAGTTCAGGAATTCTGAAGGAGCTATGTACCCGGATGTCATGGAAACCTTTTTGGAGTGA 1221 0.4627 MVGSGASDRSKEAVGMMALHESLKRVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGSVDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSVPSKPSTIPVRPPPLFNWGQRPLSSATSMLSSPNFQQHAARLGFPKDETNMFLIPHASSESARVEDMMGEHENDIKWPNGLSFFNALTGRTDDAKLLFNPDTLGNKPGDQTQHHPLSQNPNSDASNMQNANATHPNEFLSLDNNQDDARKMDKFKRSFTLPARVASSSSSTSMDHHQTQGVQFRNSEGAMYPDVMETFLE 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02586 406 MobiDBLite consensus disorder prediction 310 348 - -
Viun5g02586 406 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 81 180 IPR025610 -
Viun5g02586 406 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 75 IPR025610 -
Viun5g02586 406 MobiDBLite consensus disorder prediction 304 349 - -
Viun5g02586 406 PANTHER GB|AAF34833.1 1 406 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02586 Viun-Chr5 37072721 37075379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02586 20 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 33.728 2.37e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02586 - - gmx:100814723 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02586 5 37072721 37075379 Viun5g02586 5 37072721 37075379 ECH