Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02585 ATGGCTGACGTGGCAGGTCTAGTTGAGGCATCGGGATCGAGATTCACTTCATTGGAGCTTATTGGGCAGGGATCGTTTGGAGACGTCTATAAAGCGTTTGATAGGGAGCTCAACAAAGAAGTCGCCATCAAAGTGATTGACTTGGAAGAATCGGAGGATGAAATTGATGATATCCAGAAGGAAATTGCTGTTTTGTCTCAATGTCGATGTCCATACATTACTGAGTATTATGGTGCCTATCTCAATCAAACAAAACTTTGGATAATAATGGAATACATGGCTGGTGGTTCAGTTGCTGATCTACTCCAAGCAGGTCATCCCCTTGATGAAATGTCAATTGCTTGCATTCTACGTGACTTGCTGCATGCTGTTGATTATCTACACAGTGAAGGGAAAATTCACAGAGACCTTAAAGCTGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTAGCAGATTTTGGCGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACGCCATTTTGGATGGCGCCTGAGGTTATTCAGAATACTGATGGATATAATGAAAAGGCAGATATTTGGTCTTTGGGAATCACTGCTATTGAGATGGCAAAGGGGGAGCCTCCACTAGCCGATCTTCACCCGATGAGAGTGCTTTTCATCATACCCCGGGAGAATCCTCCACAGCTAGATGATCACTTTTCCCGTCCAATGAAAGAATTTGTCGCATTGTGCTTAAAGAAGGTTCCTGCCGAGAGGCCAAGTGCTAAGGAACTTTTGAAGGACCGTTTTATTCGGAATGCTAGGAAGAGTTCAAAGCTTGCAGAAAGAATAAGAGAACGTCCAAAATACCAAATAAAGGAAGAAGATCTGGAAACACCTAGAAAGGCCTCAAGAGGGATAGGGGAAGGATCAGATACTGTAAAAGTGGCTAGAGATGTCAGAGGTGAAGAAAATAATCGATCCAGTGATCAGGGTAAAACCCTGAAAAGTGCTGGATGGGACTTCAATATTGGTGGATCACAGGGTACTGGAACCTTTCGTAATGTTTCTCGACCACCTCAGTTTAGAGAGAAGAAAGCTGAAGCTTCACATAATCAGTTAACCCAAAGAAAAGCTCCTGAGAGTGGTTATCAAGGGGGACCTGCTAATAGAAGGGCACTTAGTGAGTCACTTGAAAGTTCCTCTGGAAGAGATCGAGTTCCCCACCATGTTGAGCATCGGGACAATCACACTGAAGATGATGAATTATCCGGAAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGGTCAAGGTCATCTGTATTCGGTGACCAGAGCTCTCAATATAGTAGCAGCCATTCTTCTTTTGATGATGCCTCTACAAGTGGGACTGTTGTTTTACGTGGCCAGCATGATGAGCCTGGTTCTCCACAGCCACTAAGGTCTCGACTAGGACTTAATGACAGAAATTCAAATTCCTCAATGGAAGACAGTTCGGCAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGAGGGCTCAGGAAAGTGGGTTCTCGAGAAAGATTGGCCCGAGGAAAAATCAACAATGATAGACAGGAGGACAAGAAAGATGGAAAGGCTAGCAGCTTTGATTCTTCAAGGGGCATGTCAAGATCACATCATGCTAATAATGATGAAGGAAGTGCTAAAATAATGTCATCCTCTGTGCCATTATCTGCTTTACTTGTTCCTTCATTAAAAGAGGCCATTGCTGATGATCCAGAAGGGGCAGTTTTGCGGGCAGTTATCAATTCTTTAATAAACATGGAGGGCTCAAAACCTAAATCCTGTGAAGCTCTTCTCAGACAGTTGCTTCAGCGATTGGCAAGTTCAAAGGAAGATTCATTGAAGGACCTGCAGCGGCTAGCAGGGGAACTATTCAGCAAGACCAAGTCCGCTGAAGAAACCCGAAATGCACAGGCTGATAACAGGAAAAAACAACAAAGCAAGGAATATAATCCTAATAGCAATTTAAGTCCACTAGCAAGATTTCTTCTATCAAGATGGCAAGGCCAAACCTCCCGAGATCTAAACTCATCTTAA 2076 0.433 MADVAGLVEASGSRFTSLELIGQGSFGDVYKAFDRELNKEVAIKVIDLEESEDEIDDIQKEIAVLSQCRCPYITEYYGAYLNQTKLWIIMEYMAGGSVADLLQAGHPLDEMSIACILRDLLHAVDYLHSEGKIHRDLKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDDHFSRPMKEFVALCLKKVPAERPSAKELLKDRFIRNARKSSKLAERIRERPKYQIKEEDLETPRKASRGIGEGSDTVKVARDVRGEENNRSSDQGKTLKSAGWDFNIGGSQGTGTFRNVSRPPQFREKKAEASHNQLTQRKAPESGYQGGPANRRALSESLESSSGRDRVPHHVEHRDNHTEDDELSGNGSGTVVIRSPKGSRSSVFGDQSSQYSSSHSSFDDASTSGTVVLRGQHDEPGSPQPLRSRLGLNDRNSNSSMEDSSANLAEAKAAIQGGLRKVGSRERLARGKINNDRQEDKKDGKASSFDSSRGMSRSHHANNDEGSAKIMSSSVPLSALLVPSLKEAIADDPEGAVLRAVINSLINMEGSKPKSCEALLRQLLQRLASSKEDSLKDLQRLAGELFSKTKSAEETRNAQADNRKKQQSKEYNPNSNLSPLARFLLSRWQGQTSRDLNSS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02585 691 MobiDBLite consensus disorder prediction 481 498 - -
Viun5g02585 691 MobiDBLite consensus disorder prediction 278 499 - -
Viun5g02585 691 MobiDBLite consensus disorder prediction 513 560 - -
Viun5g02585 691 MobiDBLite consensus disorder prediction 515 540 - -
Viun5g02585 691 MobiDBLite consensus disorder prediction 278 301 - -
Viun5g02585 691 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02585 691 MobiDBLite consensus disorder prediction 641 660 - -
Viun5g02585 691 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Viun5g02585 691 MobiDBLite consensus disorder prediction 419 465 - -
Viun5g02585 691 Coils Coil 642 662 - -
Viun5g02585 691 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 640 - -
Viun5g02585 691 MobiDBLite consensus disorder prediction 327 353 - -
Viun5g02585 691 Gene3D Transferase(Phosphotransferase) domain 1 11 301 - -
Viun5g02585 691 MobiDBLite consensus disorder prediction 308 326 - -
Viun5g02585 691 Coils Coil 41 68 - -
Viun5g02585 691 MobiDBLite consensus disorder prediction 641 670 - -
Viun5g02585 691 CDD STKc_MST3_like 13 287 - -
Viun5g02585 691 SUPERFAMILY Protein kinase-like (PK-like) 13 288 IPR011009 -
Viun5g02585 691 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02585 691 MobiDBLite consensus disorder prediction 394 418 - -
Viun5g02585 691 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02585 691 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02585 Viun-Chr5 37009030 37023112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02585 1 688 MAP Kinase Kinase Kinase Kinase AT3G15220 63.286 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Viun5g02585 Pkinase 3.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02585 K08838 - gmx:100815042 1128.62