Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02559 ATGAAGAAACCGAAGCAAACGCAGTTGAATCCCAATTGGCTTCAACTCCAACAAAAGCTGAATGACTCCAAGGCTCCAAGGACCTTCAAAAGTTCAGATAAAGTTACCCCAGAATCAATATTGGGGAAACGTAAAGAGAGACCAGACGAGGAATCCAATGATAGTCAGATTAATCCTCTTATTCCTGTAAATGATGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTTGGTGTTGGTCAAGGAAACAAAAGTGCTCTTGGAAGAGTAACTCTGGTTAATAAGTGGGGAAATGTTATTTATGACGAGTTTGTTCGGCCAATGGAACGGGTTGTTGACTTCCGCACTAGAATCAGTGGCATAAGGCCTCGAGATCTTAGAAAAGCAAAGGATTTTTGGACTGCTCAGAAGAAAGTGTCAGAGTTGATCAACGGAAGGATCCTTGTTGGTCATGCCTTGTCCAATGACTTTAAGGCATTGTTATTAACTCATCCCAAGAAGGATATAAGAGATACCTCCGAGTACCAACCATTTCTAGGATCAAGTAGCAGAAGAGCACTGCGACATCTTGCTGCCGAACATCTTGGTGTGCAGATCCAAACAGGAGAGCACTGCCCAATAGAAGATGCTCGTGCTGCTATGCTGCTTTACCAAAGACATAAGAAGGACTGGGAAAAGAGCATAAAAGATCAATTTCGGTTCAAGCAGAAGCAAAGGAAATCGAAGCAGAAAAAGAAGCACAAGATTGAAGATGCTTCAAATGCAAACCATGTTGAAATTGAATCCTAG 798 0.4223 MKKPKQTQLNPNWLQLQQKLNDSKAPRTFKSSDKVTPESILGKRKERPDEESNDSQINPLIPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTRISGIRPRDLRKAKDFWTAQKKVSELINGRILVGHALSNDFKALLLTHPKKDIRDTSEYQPFLGSSSRRALRHLAAEHLGVQIQTGEHCPIEDARAAMLLYQRHKKDWEKSIKDQFRFKQKQRKSKQKKKHKIEDASNANHVEIES 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02559 265 MobiDBLite consensus disorder prediction 250 265 - -
Viun5g02559 265 FunFam Interferon-stimulated exonuclease gene 20 68 239 - -
Viun5g02559 265 MobiDBLite consensus disorder prediction 1 63 - -
Viun5g02559 265 SMART exoiiiendus 71 229 IPR013520 -
Viun5g02559 265 MobiDBLite consensus disorder prediction 26 53 - -
Viun5g02559 265 CDD REX4_like 73 221 IPR037431 GO:0006364|GO:0008408
Viun5g02559 265 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 30 248 IPR047021 GO:0004527
Viun5g02559 265 SUPERFAMILY Ribonuclease H-like 72 221 IPR012337 -
Viun5g02559 265 MobiDBLite consensus disorder prediction 236 265 - -
Viun5g02559 265 MobiDBLite consensus disorder prediction 1 25 - -
Viun5g02559 265 Gene3D - 67 250 IPR036397 GO:0003676
Viun5g02559 265 Pfam Exonuclease 73 220 IPR013520 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02559 72 222 C2H2 Transcription Factor Family AT5G40310 38.323 1.47e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02559 K18327 - gmx:100819122 447.588