Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02552 ATGGCACAGTTACCTCCCAAAATACCAACCATACCCCAAAATTGGCCATCTTTTTCTCACCAAAGGGTGCCCACAATGGCCAACTTCACCCCCACAACCTCATCCACCACCACCACCACCGTCGCCGCCGCCGCCACCACCACTGCCCCCTCCCAACCCTCATGGGTCGACGAATTCCTCGACTTCTCCTCCACCCGCCGGGGGGCTCACCGGCGATCCGCCAGCGACTCCATTGCCTTCCTCGAAACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGATCGGCTCGACGAGGACCAGCTGATTTCCATGTTCTCTGACGACATTGCCGCCGCGGCACTCCCGCCGCCGCCGCTTTCGTCGGCGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGACGTTGGACCTCAAGCCGAAGACGGAAAAGGTTGAAGAGGAGAGCTCGTGCAAGAATGAGGCGGCGGCGCTGCAACTCTCCGCCACTACCACCTCCCCTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAATAGGCAATCAGCACAGAGATCAAGGGTAAGAAAGCTACAATACATCTCTGAGCTTGAAAGGAGCGTAACAACATTGCAGACGGAGGTATCAGCATTGTCTCCACGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAGGCATTAAAGAAGGAAATAGAGAGATTGAGGCAAATCTACCATCAACAGAACCTACAGAAGATGAACAACAATCTTCAAACCCCACCAACATCACAGCCACAAGCACATTCTCTTCATCAGCATCAGCAGCAGCAGATAGCAGTGTCTCAACCATTGGGATGCAAGGAGAAGGAGCAGCTCCTGAGTTGA 978 0.5317 MAQLPPKIPTIPQNWPSFSHQRVPTMANFTPTTSSTTTTTVAAAATTTAPSQPSWVDEFLDFSSTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDIAAAALPPPPLSSASNPSSPSSDQNSNNEEKPMAMTLDLKPKTEKVEEESSCKNEAAALQLSATTTSPETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMNNNLQTPPTSQPQAHSLHQHQQQQIAVSQPLGCKEKEQLLS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02552 325 Coils Coil 262 282 - -
Viun5g02552 325 Pfam bZIP transcription factor 183 227 IPR004827 GO:0003700|GO:0006355
Viun5g02552 325 MobiDBLite consensus disorder prediction 124 139 - -
Viun5g02552 325 FunFam Basic leucine zipper 61 182 255 - -
Viun5g02552 325 Gene3D - 182 255 - -
Viun5g02552 325 PANTHER BASIC LEUCINE ZIPPER 34 1 308 - -
Viun5g02552 325 MobiDBLite consensus disorder prediction 113 139 - -
Viun5g02552 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 233 IPR004827 GO:0003700|GO:0006355
Viun5g02552 325 SMART brlzneu 179 243 IPR004827 GO:0003700|GO:0006355
Viun5g02552 325 SUPERFAMILY Leucine zipper domain 183 237 IPR046347 GO:0003700|GO:0006355
Viun5g02552 325 MobiDBLite consensus disorder prediction 285 312 - -
Viun5g02552 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Viun5g02552 325 CDD bZIP_plant_RF2 184 234 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02552 Viun-Chr5 36552542 36555839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02552 1 261 bZIP Transcription Factor Family AT3G58120 53.220 3.29e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun5g02552 bZIP_1 7.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02552 - - gmx:100820197 447.203