Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02540 ATGGGTGCGAAGAAATGGTTCAAGATAATAATCAGATTGAAGAAATCGAAGAAATCCAAACAAGAAAAGGTACAGTCTACTGATGAAACTTCAGATGAATGTTCAAACATAAAGCAAAGTAGTCGTGAAGAGTCAAGTGGCATTCCCAATGAAAGTTTGATTATGGATCGGACAGTTCCATCAAGATTGATGGACGATGTGGCAGCTACTAGGATTCAAAATGCATTCCGTTCATTTATGGCAAGAAGAACATTACATCATCTAAGGGGAGCAGTGAAATTCGAAGCTTTAATTCAAGATCACCTAGCCAGAGAGCAAACAGCAACCGCACTGAACTATATACATTCATGGAGCAGAATACAAGAACAAATTAGAGCTCGAAGAATCTGTATGATAACAGAAGCCAGGATTAAGAAAAAGAAACTGGAAAACCAGTTAAAACTTGAGGCTAAGATTCAGGAGCTTGAGGTGGAGTGGTGCAGTGGTTCTGAAACCATGGAAGAGATAATTTGCAGGTTACATCAGCGAGAGGAAGCAGCAATTAAACGAGAGAGAGCCATGGCATATGCCTTTTCCCATCAGTGGAGGCCAAACTGTAGCCAGTATTTTGGTCAGGCTTCTTATAGTCTTGGTAAAGAAAGTTGGGGTTGGAGCTGGACCGAGCGTTGGGTGGCAGCACGTCCTTGGGAAGTACAGGTTAGAGTTCAGCCCTCCAACACAAAGAAAGCTAATGGCCATGATCAAAAAATAAAATTCAACAAGATGAACTACAGTGAAAGCAAAGCAGCCTTGGCTAAACCTTCCCTGTCAAACGGGAAGGAAACCGGAAAAGGAAAGGAAAACAGTACTTCAGGGCTGTCAAAGAACATCGTTACCAAATAG 882 0.4184 MGAKKWFKIIIRLKKSKKSKQEKVQSTDETSDECSNIKQSSREESSGIPNESLIMDRTVPSRLMDDVAATRIQNAFRSFMARRTLHHLRGAVKFEALIQDHLAREQTATALNYIHSWSRIQEQIRARRICMITEARIKKKKLENQLKLEAKIQELEVEWCSGSETMEEIICRLHQREEAAIKRERAMAYAFSHQWRPNCSQYFGQASYSLGKESWGWSWTERWVAARPWEVQVRVQPSNTKKANGHDQKIKFNKMNYSESKAALAKPSLSNGKETGKGKENSTSGLSKNIVTK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02540 293 PANTHER IQ-DOMAIN 5-RELATED 1 267 - -
Viun5g02540 293 ProSiteProfiles IQ motif profile. 65 93 IPR000048 GO:0005515
Viun5g02540 293 MobiDBLite consensus disorder prediction 262 293 - -
Viun5g02540 293 MobiDBLite consensus disorder prediction 17 52 - -
Viun5g02540 293 MobiDBLite consensus disorder prediction 274 293 - -
Viun5g02540 293 Coils Coil 132 158 - -
Viun5g02540 293 MobiDBLite consensus disorder prediction 20 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02540 Viun-Chr5 36284059 36287275 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02540 1 278 IQD Protein Family AT3G15050 48.029 4.02e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02540 - - gsj:114375165 484.182