Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02529 ATGTTTACTTTCTATCTTTCTTTGGCTTTCTTGAAGCACTGTAACTCAACCAAACTATTTCCAAATACCACACACCAATTGAAGTACAAGAGAACACCAAGTCAAGCCCCTTGTTGCAAAGAGTCAAACCCCATTTGCATTACAAAACCTATAAGTGGCACACAGTTTGGTGTGTTAGTTCATCTCCCTATCTTGCTCTCTGTCTCCTCTTCTTCACATAACATAGCCAATACATGCATTTCTTCAATCACTTTGCGTGCATACAAACGCACAATGGGGTCACCATTCAGGCCAATCTCATGCACCAGAAAAACTCCATACAGAATAGAAACCAGGAACTTGTCATACAGGTTGTGCAGCCAAGTTGATGAGTATAGAAGTCTTTGTTTTGGTTCCAGTCCAGGGAGAGGTGCCAAGTTCATTTTGAAGGATGTGAATTGCGAGGCAAGGCCAGGGGAGCTGACTGCCATTGCTGGTCCTAGTGGAGCTGGAAAAACCACACTACTTGAGATTCTTGCAGGAAGAATACCCCCATGTAATAAAGTTTCTGGTCATGTGCTTGTCAATCATAAGCCTATGGATGTGAACTGGTTTAGAAGAGCATCAGGGTATGTGACACAAGATGATGCTTTATTCCCTTCTCTGACAGTTAGAGAGACACTGATGTATAGTGCCATGTTGAGGCTTCCTGGGGGAAGAAAAGTTGCTGCTGTCAGAGTTGAAGAGTTGATGAAGGAGCTTGGGTTGGAGCATATTGCAGATTCAAGGATTGGAGGTGGAACAGACCATGGTATATCTGGAGGAGAAAGGCGTAGAGTTTCCATTGGTGTGGACTTGGTTCATGACCCTGCTGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCAGCTCTTAATGTAGTCTCATTGCTTAGACTTGTGGCGTTTAATCAAGGTAAGACAATTATCTTAACTATCCACCAACCTGGTTTCCGAATCTTAGAGCTGTTTGATGGTCTTATTTTGCTGTCCGATGGATTTGTGATGCATAATGGATCATTGAGTCTTCTTGAGGCTAGACTCAAGTTAGCTGGGCACCACATTCCTGACCATGTCAATGTGCTTGAGTTTGCTCTTGATGTGATGGAAAGCTTGGTTATACATACTTCAGAATCTGGGAACAACCAGTTTCTGGTGAGAGAGAACCAAGATCATAAAATGAGAATGCAGCACTCTAAGGTTGTCAAAGTAAAGGCAATTGCATATTCAAATTCTCCTACGGAGGAGATTGCAATCCTGGGACAAAGATTTTGCTGCAACATATTCAGAACCAAGCAATTGTTTGTGAGCAGAATCATACAGGCCATAGTAGCTGGTTTTATTCTGGGGAGCATATTTTTGAATGTTGGCAATGAAAAAAGTCATGTAGCATTGCAAACAAGAAGTGGATTCTTTGCTTTCAGCCTTACCTTTTTGTTATCATCTACAACAGAAGGCTTGCCTATTTTCTTGGATGAGAGAAGAAGTTTTATGAGAGAGACCTCTGGAGGAGCTTATAGAGTTTGTTCCTATGTTTTAGCTAATGCCCTTGTGTTCCTTCCCTTCCTTCTATTGGTTGGTCTTCTGTACTCTACTCCAGTTTATTGGCTTGTAGGATTAAGGAAAGATATCGATGGTTTCCTTTACTTCTCCTTGGTGGTTTGGTTGGTTCTACTCATGTCCAATTCTCTTGTGGCTTGTTTTAGCGCTCTGGTGCCAAATTTCATCCTGGGAACCTCAGTGATTGCAGGTCTAATGGGGTCTTTCTTTCTATTTTCAGGATATTTCATATCTCAAGAAAAAATACCAAGTTATTGGATTTTTATGCACTATTTGAGCCTATTCAAGTATCCATTTGAGTGCCTTATGATAAATGAGTATGGGGGAGAGAGAGGGAAGACGAGGTGCTTAGAAATTAGCAATGGAAAATGCATACTACATGGAGTTGAATTCTTAAGACAACAGGGTCTAAAAGATTCACAAAAATGGAGCAATTTGCCTGTAATGTTGAGTTTCATAGTGGGATACAGAGTGCTTAACTTTTTCATTCTTTGGTTCAGATGCTACAGGACAAGAAAATAG 2109 0.4106 MFTFYLSLAFLKHCNSTKLFPNTTHQLKYKRTPSQAPCCKESNPICITKPISGTQFGVLVHLPILLSVSSSSHNIANTCISSITLRAYKRTMGSPFRPISCTRKTPYRIETRNLSYRLCSQVDEYRSLCFGSSPGRGAKFILKDVNCEARPGELTAIAGPSGAGKTTLLEILAGRIPPCNKVSGHVLVNHKPMDVNWFRRASGYVTQDDALFPSLTVRETLMYSAMLRLPGGRKVAAVRVEELMKELGLEHIADSRIGGGTDHGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNVVSLLRLVAFNQGKTIILTIHQPGFRILELFDGLILLSDGFVMHNGSLSLLEARLKLAGHHIPDHVNVLEFALDVMESLVIHTSESGNNQFLVRENQDHKMRMQHSKVVKVKAIAYSNSPTEEIAILGQRFCCNIFRTKQLFVSRIIQAIVAGFILGSIFLNVGNEKSHVALQTRSGFFAFSLTFLLSSTTEGLPIFLDERRSFMRETSGGAYRVCSYVLANALVFLPFLLLVGLLYSTPVYWLVGLRKDIDGFLYFSLVVWLVLLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISQEKIPSYWIFMHYLSLFKYPFECLMINEYGGERGKTRCLEISNGKCILHGVEFLRQQGLKDSQKWSNLPVMLSFIVGYRVLNFFILWFRCYRTRK 702
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02529 702 Pfam ABC-2 type transporter 323 390 IPR043926 GO:0140359
Viun5g02529 702 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 84 687 - -
Viun5g02529 702 FunFam ABC transporter G family member 10 126 372 - -
Viun5g02529 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 357 IPR027417 -
Viun5g02529 702 ProSitePatterns ABC transporters family signature. 265 279 IPR017871 GO:0005524|GO:0016887
Viun5g02529 702 Gene3D - 104 367 IPR027417 -
Viun5g02529 702 Pfam ABC-2 type transporter 425 636 IPR013525 GO:0016020|GO:0140359
Viun5g02529 702 CDD ABCG_EPDR 132 348 - -
Viun5g02529 702 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 109 366 IPR003439 GO:0005524
Viun5g02529 702 SMART AAA_5 151 343 IPR003593 GO:0016887
Viun5g02529 702 Pfam ABC transporter 142 293 IPR003439 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun5g02529 Viun-Chr5 36127248 36129384 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02529 103 353 Calmodulin-binding Proteins AT2G36910 27.413 7.48e-11 63.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02529 K05681 - gmx:100807754 1095.88