Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02515 ATGGCTACCTTCTCCGAGGAACGCGAGAACTTTGTATATGCTGCAAAGTTAGCTGAACAAGCTGAACGATATGACGAAATGGTGGATGCGATGAAGAAGGTGGCGAAGCTGGACGTTGAGCTGAGTGTGGAGGAGAGGAACTTGTTCTCTGTTGGATACAAAAATGTGGTGGGGTCACGGAGAGCTTCATGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTTAAGCGCATCAGGGATTATAGGCAGAAGGTCGAGTTGGAGCTGTCTAACATTTGCAGTGACATTATGATAATTTTAGATGAGCATCTTATTCCATCCACAAATATTGCAGAGTCCACATTGTTTTATTATAAAATGAAAGGAGACTATTACCGGTACTTGGCAGAATTCAAAGCTGGTGATGAAAAGAATGAGGTAGCAGATCAGTCACTTAAAGCATATCAGACAGCTGCTAGCACTGGTGAGAATGAATTACAACCTACACATCCCATTCGTTTGGGTCTGGCTCTAAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCATCTTGCTAAGCAAGCCTTTGATGATGCTGTCTCAGAGCTAGATTCTCTGAATGAGGAATCTTACAAGGACGGTACCTTAATCTTGCAGCTGTTGAGGGATAACCTTACTTTGTGGACTTCTGATATCCCTGAAGAGGGTGGTAACATATAG 741 0.4265 MATFSEERENFVYAAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIRDYRQKVELELSNICSDIMIILDEHLIPSTNIAESTLFYYKMKGDYYRYLAEFKAGDEKNEVADQSLKAYQTAASTGENELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDSLNEESYKDGTLILQLLRDNLTLWTSDIPEEGGNI 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02515 246 PANTHER 14-3-3 PROTEIN 8 239 IPR000308 -
Viun5g02515 246 SMART 1433_4 8 245 IPR023410 -
Viun5g02515 246 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Viun5g02515 246 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Viun5g02515 246 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Viun5g02515 246 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Viun5g02515 246 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Viun5g02515 246 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Viun5g02515 246 FunFam 14-3-3 protein epsilon 4 246 - -
Viun5g02515 246 Pfam 14-3-3 protein 15 236 IPR023410 -
Viun5g02515 246 PIRSF 14-3-3 2 245 IPR000308 -
Viun5g02515 246 Coils Coil 14 34 - -
Viun5g02515 246 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Viun5g02515 246 Gene3D - 2 244 IPR036815 -
Viun5g02515 246 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02515 Viun-Chr5 35854881 35856835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02515 5 245 14-3-3 family AT2G42590 76.763 1.89e-141 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02515 K06630 - gmx:547574 452.595