Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02514 ATGGTGGATGCGATGAAGAAGGTGGCGAAGCTGGACGTTGAGCTGAGTGTGGAGGAGAGGAACTTGTTCTCTGTTGGATACAAAAATGTGGTGGGGTCACGGAGAGCTTCATGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTTAAGCGCATCAGGGATTATAGGCAGAAGGTCGAGTTGGAGCTGTCTAACATTTGCAGTGACATTATGATAATTTTAGATGAGCATCTTATTCCATCCACAAATATTGCAGAGTCCACATTGTTTTATTATAAAATGAAAGGAGACTATTACCGGTACTTGGCAGAATTCAAAGCTGGTGATGAAAAGAATGAGGTAGCAGATCAGTCACTTAAAGCATATCAGACAGCTGCTAGCACTGGTGAGAATGAATTACAACCTACACATCCCATTCGTTTGGGTCTGGCTCTAAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCATCTTGCTAAGCAAGCCTTTGATGATGCTGTCTCAGAGCTAGATTCTCTGAATGAGGAATCTTACAAGGACGGTACCTTAATCTTGCAGCTGTTGAGGGATAACCTTACTTTGTGGACTTCTGATATCCCTGAAGAGGGTGGTAACATATAG 663 0.4238 MVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIRDYRQKVELELSNICSDIMIILDEHLIPSTNIAESTLFYYKMKGDYYRYLAEFKAGDEKNEVADQSLKAYQTAASTGENELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDSLNEESYKDGTLILQLLRDNLTLWTSDIPEEGGNI 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02514 220 PRINTS 14-3-3 protein zeta signature 129 155 IPR000308 -
Viun5g02514 220 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Viun5g02514 220 PRINTS 14-3-3 protein zeta signature 63 87 IPR000308 -
Viun5g02514 220 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Viun5g02514 220 PRINTS 14-3-3 protein zeta signature 94 116 IPR000308 -
Viun5g02514 220 PRINTS 14-3-3 protein zeta signature 183 212 IPR000308 -
Viun5g02514 220 SMART 1433_4 1 219 IPR023410 -
Viun5g02514 220 ProSitePatterns 14-3-3 proteins signature 2. 192 211 IPR023409 -
Viun5g02514 220 Gene3D - 1 218 IPR036815 -
Viun5g02514 220 FunFam 14-3-3 gamma 1 1 219 - -
Viun5g02514 220 PIRSF 14-3-3 1 219 IPR000308 -
Viun5g02514 220 SUPERFAMILY 14-3-3 protein 2 217 IPR036815 -
Viun5g02514 220 Pfam 14-3-3 protein 1 210 IPR023410 -
Viun5g02514 220 PANTHER 14-3-3 PROTEIN 1 213 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02514 Viun-Chr5 35854881 35856835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02514 1 219 14-3-3 family AT2G42590 77.626 1.01e-129 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02514 K06630 - gmx:547574 405.601