Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02481 ATGACTTCTTTCACCAGCTTCTACAAATTTTGGTTCCTGCAGTTGAAGATCATGGTGAAGGATCTGAAGGAGGAGCACAGTCATGAAGGCATGGAGAAGGTGCTGAGACACCACGGAGAATACTACAAAGAAAAATGGATTGCGATGAACAAGGATCCTCTCAGCATGTTCACCTCGCCGTGGAACACCAACCTTGAACGCTCCCTCCACTGGATCACAGGGTGGCGCCCCACCACCGCCTTCCACCTCATCTACACCGAGTCTTCTCTCCTCTTTGAGACTCACATCATCGATATCCTCCATGGCCTCCGCACCGGAGACCTCGGCGATCTCAACCCCTCCCAGTTTCGTTACATGAGCGATCTTCAGTGTGATACTGTGAGAGAGGAGAATGAGATTACTGAAGGGTTATCAGAGTGGCAGAACAGTGCGAGCGAGATGATGGGTTGTGAGATGGAGATGAAGGAGAAGATCAGAGAGCTGATACTTATCATAAAGAGAGCAGATGATCTACGGCTGAAAACGCTGCAGGGTGTGGTGAGGTTGCTTTCAAGGCAGCAGGCTATGGAATTCTTGATTGCCTCAGGAGAGTTACTCATTGGGATTCACAATTGGGGACTCATTCACGACTCAAGAAGAAATTGA 645 0.4915 MTSFTSFYKFWFLQLKIMVKDLKEEHSHEGMEKVLRHHGEYYKEKWIAMNKDPLSMFTSPWNTNLERSLHWITGWRPTTAFHLIYTESSLLFETHIIDILHGLRTGDLGDLNPSQFRYMSDLQCDTVREENEITEGLSEWQNSASEMMGCEMEMKEKIRELILIIKRADDLRLKTLQGVVRLLSRQQAMEFLIASGELLIGIHNWGLIHDSRRN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02481 214 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 3 213 - -
Viun5g02481 214 Coils Coil 214 214 - -
Viun5g02481 214 Pfam Seed dormancy control 25 86 IPR025422 GO:0006351|GO:0043565
Viun5g02481 214 ProSiteProfiles DOG1 domain profile. 1 212 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02481 Viun-Chr5 35533718 35534892 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02481 31 207 bZIP Transcription Factor Family AT5G06960 30.508 6.25e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02481 - - pvu:PHAVU_005G081900g 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02481 5 35533718 35534892 Viun5g02481 5 35533718 35534892 ECH