Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02450 ATGACGTCGGGGACGAGACTACCCACGTGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGAAGAAGAAGAGCCATAGCAGCCAAGATCTTCGCAGGTCTGAGGATGTATGGAAACTTCAAACTCCCCAAACACTGCGACAACAACGAAGTCCTCAAAGCCCTTTGCAACGAAGCAGGTTGGACCGTTGAACCAGATGGAACCACTTACCGCAAGGGATGCAAGCCTTTAGAGCGCATGGACATAGTTGGTGGATCATCAGCAGCGAGTCCTTGTTCATCCTACCATCCAAGTCCATGTGCTTCCTACAATCCAAGCCCTGGTTCATCTTCCTTCCCAAGCCCATCTTCATCTCCATACACCAACATTCCCAATGCTGATGGCAATTCTCTCATTCCATGGCTCAAAAACCTCTCAACTGCTTCATCTTCTGCATCGTCTCCCAAACTTCCCCATCTCTACCTCCACAGCGGCTCCATCAGTGCTCCTGTCACGCCTCCTCTGAGCTCTCCAACCGCCAGAACACCAAGAATCAATGCCGAGTGGGAGGATCAGTCTGTGCGGCCGGGGTGGACCAGACAACAGCACTACTCATTCCTGCCATCGTCTAGTCCACCGAGCCCCGGCCGCCAAGTTGTTGATCCTGAATGGTTTGCTGGGATCAAACTTCCTCATGTCAATCCAACCTCACCAACTTTCAGCTTGATCTCCTCAAACCCTTTTGCCTTCAAGGAAGATGGTTTGGCAGGAAGTGGTTCAAGAATGTGGACTCCTGCTCACAGTGGAACATGCTCTCCTGCTGTTGCACCAGGAACCGATCACAATGCTGACATTCCAATGTCTGAAGCTGTTTCAGATGAATTTGCATTTGGAAGCAACATGCTGGGGCTTGTGAAGCCATGGGAAGGAGAGAGGATTCATGAGGAATTTGGATCAGATGATCTTGAACTCACACTTGGTAACTCAAAAACCAGATGA 978 0.502 MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSSAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYTNIPNADGNSLIPWLKNLSTASSSASSPKLPHLYLHSGSISAPVTPPLSSPTARTPRINAEWEDQSVRPGWTRQQHYSFLPSSSPPSPGRQVVDPEWFAGIKLPHVNPTSPTFSLISSNPFAFKEDGLAGSGSRMWTPAHSGTCSPAVAPGTDHNADIPMSEAVSDEFAFGSNMLGLVKPWEGERIHEEFGSDDLELTLGNSKTR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02450 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Viun5g02450 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
Viun5g02450 325 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02450 Viun-Chr5 34583971 34588270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02450 1 325 BZR Transcription Factor Family AT1G78700 70.149 3.64e-140 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Viun5g02450 BES1_N 3.1e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02450 - - gmx:100795369 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02450 5 34583971 34588270 Viun5g02450 5 34583971 34588270 ECH