Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02436 ATGGCACCTCAATTGGCATTAACCCACTCTTCTCTTCCCCGTATTCCTCCCTCTGCTACATCTCTTGGTTTAGGAAGGAATAAAGATTCGATTATAATCAACAGGACAAATAATCAAACCATGACAGCCTTTGCAGGCAATGCTCTTCGTAATTCAGCTATCCAACTCATTACTGTTTCATCTCCTCTATCTTCTGATAAAGAAGCTAGCCTCTCACTCAAACCTCCTATGTCTCAAAGAGGCAATTCTAAGTTCTGTGGACAAGCATATATATATCATTCGTCTGGTTTCCGAATCCCAGAAAATGCTGAGAAGCCAGAATGGTGGTGGAGAGCTTTATCCTGTATTCCCTACCTAATAGCATTGCAGATGTCTGCAACTGGGTTTTATCTAGAACCTATCATTCAAAAATTTCCATTCTTTCAGAGTTTGATCTTCTATATCCCAGGAGGTGTCAACCGATTACCAATCTGGTTTCCCATGTTATACTGCTATCTGGCTATTGTAGGAGTGGTGAAAAACAGGGACTTGCCTCTTATCTTCAGATTCCATGTAATGACGGGAATGCTGCTGGAACTTGCTCTACAGATAGTGTACATTGCAAGCAACTTCATGCCACTTATACACTTCCCAGGGGGCACATTGGGGTCATATTACTGGGCTGGTATTGCATTGGCATTTATTTTTATAATGATAAAGTGCATAAGGTGTGCGCTTCTGGGAACATTTGTGAGCATCCCTTTGGTTAGTGAATCAGCTTTCATTCATTCTCTATTTGGTTTAGGAGGATTACAACGGCCTTTTTAG 807 0.4126 MAPQLALTHSSLPRIPPSATSLGLGRNKDSIIINRTNNQTMTAFAGNALRNSAIQLITVSSPLSSDKEASLSLKPPMSQRGNSKFCGQAYIYHSSGFRIPENAEKPEWWWRALSCIPYLIALQMSATGFYLEPIIQKFPFFQSLIFYIPGGVNRLPIWFPMLYCYLAIVGVVKNRDLPLIFRFHVMTGMLLELALQIVYIASNFMPLIHFPGGTLGSYYWAGIALAFIFIMIKCIRCALLGTFVSIPLVSESAFIHSLFGLGGLQRPF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02436 268 Pfam Chloroplast import apparatus Tic20-like 79 253 IPR005691 -
Viun5g02436 268 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 59 257 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02436 Viun-Chr5 34289408 34296665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02436 98 267 Chloroplast and Mitochondria Gene Families AT4G03320 52.941 2.00e-68 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02436 - - gmx:100790611 418.698