Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02423 ATGAGCTTCTATCTACTTTTCCATCTTTGGTTTCTTGCCTTTTCTTTTATCTCTTCTATGGCCTGGGGAGCTACTTTGCCCGAAGATGAAGTGGAAGTAATGAAAGAGATAGGTAAAAGAGTCGGGAAGAAGGATTGGGATTTCAATGTAGATCCATGCAGTGGACAAAGAAATTGGACTTCATCTATTCAAGTCAAGGGATTTGAAAATGCTGTCACTTGCAATTGCCTTTTTGCCAATGCTACTATCTGCCACGTCGTCAGCATTGTTCTGAAGTCACAAAATCTGTCGGGCACACTCCCAAGTGAACTAGTGAGATTGCCATACCTCCAAGAAATTGACCTCACAAGAAACTACCTTAATGGTACAATACCTCCACAATGGGGCTCCACCAACCTTGTCAACATATCCATTCTTGGAAATAGGGTAACAGGTCCAATACCAAAAGAACTAGGAAACATCACCACACTGAAAAGTTTGGTCCTGGAATTCAATCAATTATCTGGTGAGCTTCCTCCAGAGCTTGGGAATCTCCCTCAACTTGAAAGATTGCTTCTTACCTCCAACTATTTTACGGGAAATTTACCTGCAACATTTGCTAGGCTCACTACACTAAAGCAAATTCGACTTGGTGACAATCAGTTCTCTGGAACTTTACCAGATTTCATTCAGAGATGGAGAAGTCTGGAGAGGCTGGTGATGCAAGGGAGTGGTTTCAGTGGGCCAATTCCTTCTGGAATTTCATTTTTGAACAACCTCACTGATTTGAGAATTAGTGACTTGAAAGGACCAGATTCTACATTCCCCCAACTTAAAAACTTAACAAATTTGCAGACACTAATACTGAGGAGTTGCAATCTTATAGGAATGGTTCCTGAATACCTCGGAGATTTTACGGGCTTACGATCATTAGATCTCAGCTTTAACAAATTAACGGGACCGATTCCAAGAACCTTGGGTGGCCTAAACGATATAAATATATTATATTTAACCGGAAACCGTTTCACTGGACCACTACCCAACTGGATAGATAGGCCAGACTACACTGATCTCTCATACAACAATTTGAGCATCCAAAACCCAGAGCAATTGACCTGTCAACAGGGAAGTGTGAACTTGTTTGCATCATCATTGAAGGGAAATAATGACTTGGGAATCATTCCATGTCTAGGGAAGATTAACTGTCCTAAAACCTGGTACTCTCTCCATGTAAATTGTGGAGGGAAGTTAATTTCTAATGGAAACATAAAGTATGATGATGACTCACAAGAAGCTGGACCAGCAAGGTTTCGTCAAACAGGATCAAATTGGGTATTCAGCAACACTGGTCATTTCTTTGATAGTGGTCGAGTAGATTACTATACTTGGTCTAACACAACAAAGCTTGATATGAACAATGGCGAATTATATATGGATGCACGTGTCTCTGCCCTTTCTCTCATATATTATGCCTTCTGCATGGGAAACGGAAGCTACACAATAAGCCTTCATTTTGCAGAAATAATGTTCACTCATGATCAAACCTATAGCAGCCTTGGAAGGCGCATATTTGACATATATGTTCAGAGAAAGTTGGTGCTGAAGGATTTCAATATTGCAAAAGAAGCAGGAGGAGTTGGTAAAGCAATCATTAAAAAGTTCACTACTTTTGTGAATAGTAGTACCTTAGAGATTCGGTTGCAGTGGGCTGGGAAAGGAACAACTGGTATACCGTTTGGATCAGTTCATGGTCCTCTTATATCAGCTATATCAGTTGATCCTGATTTTACACCACAAGAGGAAGATAAAGATGGTGTACCTAAGCATTATGTTGTTGGAATTGTAGTTACTGGAGCACTTGTAATCATCATAATATTTGGCGTAGCTTGGTGGAGAGGATGTTTCAGGAGAAAGGTGTCTTTAGAAAAAGAACTAATGGGTGTAGATTTCCAAACTAGCTTATTTAGCTTACGACAAATCAAAGCTGCAACTAAAAACTTTGATATTAACTTCAAGATTGGAGAAGGAGGTTTTGGACCTGTTTACAAGGGTGTTCTCTCAGATGGCACGATAATAGCAGTTAAACAACTTTCTTCTAAATCGAGACAAGGAAATCGTGAGTTTATAAACGAGATTGGTATGATTTCTGCTTTGAAACATCCTTCTCTAGTTAAACTTTATGGTTGTTGCATGGAGGGAGATCAGTTGATGCTGATATATGAATACATGGAAAACAACAGTCTTGCTCGTGCTTTATTTGCACCAGAAAAATCTCAGTTGAAGTTGGATTGGTCAACAAGGCAAAGGATATGTGTTGGTATTGCTAGAGGTTTGGCTTATCTTCATGGAGAGTCAAGGCTAAAGATAGTTCATAGAGACATCAAGGCCACTAATGTGTTATTAGACAAAGATCTCAACCCAAAGATTTCTGATTTTGGTTTGGCTAAACTTGATGAAGAGGGCTCCACACACATAACTACCAGAGTAGCTGGCACCTATGGATATATGGCTCCAGAATATGCCATGCATGGTTATTTAACTGATAAAGCAGATGTGTATAGTTTTGGCATTGTTGCACTAGAAATTATTAGTGGAAAAAGTAACACCATGAACTGGCCAAAGGAAGGATGTTTCTCTCTCGTTGATTTCGTGCATCTCTTGAGAGAACAAGGTGATCTAATGAACCTAGTTGATGAGAGGTTGGGTAATGATTTCAAAAGAGAAGAAGTAGTGATAATGATTAATGTGGGTCTATTATGCACACAAGTTTCTCCAATTCATAGACCCACAATGGCTTCAGTTGTATGCATGCTTGAAGGAAAAAGTGATGTTGAAGAGGTGGTGTTAGATACAAGTGAAGTATTAGATGGAAAGAAGTTGGAGATGAAACAATATTACAATATGAGAGAGAAAAACAAGACTCGTGAAATACCAGAAGAGAGCATCTCAATGGGTGAAACTTCAGCATTTATGTCTGATACAGATCTACACTCTATCAACATGGATTCTTCTTTCCTAAAGAAAAAGTTAATAGATATATAA 3021 0.3909 MSFYLLFHLWFLAFSFISSMAWGATLPEDEVEVMKEIGKRVGKKDWDFNVDPCSGQRNWTSSIQVKGFENAVTCNCLFANATICHVVSIVLKSQNLSGTLPSELVRLPYLQEIDLTRNYLNGTIPPQWGSTNLVNISILGNRVTGPIPKELGNITTLKSLVLEFNQLSGELPPELGNLPQLERLLLTSNYFTGNLPATFARLTTLKQIRLGDNQFSGTLPDFIQRWRSLERLVMQGSGFSGPIPSGISFLNNLTDLRISDLKGPDSTFPQLKNLTNLQTLILRSCNLIGMVPEYLGDFTGLRSLDLSFNKLTGPIPRTLGGLNDINILYLTGNRFTGPLPNWIDRPDYTDLSYNNLSIQNPEQLTCQQGSVNLFASSLKGNNDLGIIPCLGKINCPKTWYSLHVNCGGKLISNGNIKYDDDSQEAGPARFRQTGSNWVFSNTGHFFDSGRVDYYTWSNTTKLDMNNGELYMDARVSALSLIYYAFCMGNGSYTISLHFAEIMFTHDQTYSSLGRRIFDIYVQRKLVLKDFNIAKEAGGVGKAIIKKFTTFVNSSTLEIRLQWAGKGTTGIPFGSVHGPLISAISVDPDFTPQEEDKDGVPKHYVVGIVVTGALVIIIIFGVAWWRGCFRRKVSLEKELMGVDFQTSLFSLRQIKAATKNFDINFKIGEGGFGPVYKGVLSDGTIIAVKQLSSKSRQGNREFINEIGMISALKHPSLVKLYGCCMEGDQLMLIYEYMENNSLARALFAPEKSQLKLDWSTRQRICVGIARGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEGSTHITTRVAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIISGKSNTMNWPKEGCFSLVDFVHLLREQGDLMNLVDERLGNDFKREEVVIMINVGLLCTQVSPIHRPTMASVVCMLEGKSDVEEVVLDTSEVLDGKKLEMKQYYNMREKNKTREIPEESISMGETSAFMSDTDLHSINMDSSFLKKKLIDI 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02423 1006 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 30 189 - -
Viun5g02423 1006 ProSiteProfiles Protein kinase domain profile. 660 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02423 1006 Gene3D Ribonuclease Inhibitor 190 262 IPR032675 -
Viun5g02423 1006 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 629 735 - -
Viun5g02423 1006 Gene3D Phosphorylase Kinase; domain 1 627 735 - -
Viun5g02423 1006 CDD STKc_IRAK 666 933 - -
Viun5g02423 1006 Gene3D Transferase(Phosphotransferase) domain 1 736 946 - -
Viun5g02423 1006 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 957 - -
Viun5g02423 1006 SMART serkin_6 660 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02423 1006 Pfam Leucine rich repeat 275 335 IPR001611 GO:0005515
Viun5g02423 1006 SUPERFAMILY L domain-like 78 356 - -
Viun5g02423 1006 SUPERFAMILY Protein kinase-like (PK-like) 643 932 IPR011009 -
Viun5g02423 1006 Gene3D Ribonuclease Inhibitor 263 389 IPR032675 -
Viun5g02423 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Viun5g02423 1006 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 399 588 - -
Viun5g02423 1006 Gene3D Ribonuclease Inhibitor 43 189 IPR032675 -
Viun5g02423 1006 Pfam Malectin domain 401 583 IPR021720 -
Viun5g02423 1006 Gene3D - 399 587 - -
Viun5g02423 1006 Pfam Protein kinase domain 664 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02423 1006 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 195 262 - -
Viun5g02423 1006 FunFam Putative LRR receptor-like serine/threonine-protein kinase 736 943 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02423 Viun-Chr5 33944398 33956972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02423 17 961 Receptor kinase-like Gene Family AT1G53420 54.079 0.0 1009
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g02423 Pkinase 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02423 - - gmx:100786496 1744.17