Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02356 ATGGAAGAGGAAGGCACGGATTCGCGAAAGCAAGCGAAGCTCGTAATCATGGAACTGGCCAACATGATAAGCGTTCCGATGGCCCTAAACGCCGTCGTTCGCCTCAACGTTGCCGACGCCATCTGGAACGCCGGCGCCAACACCCCCATCTCCGCCGCCCAGATCCTCCCCCGCATCCTCCCCGCCGGCGACGCCGAGAACCTCCAGCGCCTCCTCCGCATCCTCACCAGCTACGGCGTCTTCCACGAGCACATCGACGCCGGCGAACGCAAGTACTCCCTCACCGACGTCGGCAAAACGCTTGTCACCGACGAGCAAGGCCTCTCCTACGGGGCTTACGTTCTCCAACACCACCAGGACGCGCTGATGCGAGCGTGGCCATTGGTGCACGAGGCAGTGGTGGACCCTACGAAGGAGCCGTTCGAGAGGGCGAACGGAGAGGGAGCGTATGGGTATTATCTGAAGAAGGAAGAGATGAACGAGCTGATGGTGAAGGCCATGTCAGGGGTGTCAGTGCCCTTTATTAAGGCCATGTTGGAGGGCTACGATGGCTTCCAAGGTGTGGAGAGGCTGGTGGACGTGGGTGGTAGTGGCGGTGACTGCCTCCGCATGATCCTGCAGAAACACCCCACCATCAAGGAGGGGATCAACTTCGATCTCCCTGAAGTTGTGGCCAAAGCACCACCAACCCCATATGTAACCCATGTGGGTGGTGACATGTTCAAATCTATTCCCCAAGGAGACGCTATCTTCATGAAGTGGGTGCTAACAACATGGACGGACGAGGAAATAAAGCAGATAATGCGGAACTGTCACAAGGCACTTCCTGAGGGAGGGAAACTGATAGCTTGTGAGCCAGTGCTGCCAGAGCACTCTGATGAGAGCCACAGAACGAGGGCGTTGCTTGAGGGTGACATTTTTGTGATGACAATCTACAGAGCTAAGGGGAAGCACAGGACTGAAGAACAGTTCAGGCTGTTAGCCATTGATGCAGGTTTCCCTCATTTCAGAGCCTTCAATGTTGACCATTTTTACACTGTTCTTGAGTTTCAGAAATGA 1059 0.5562 MEEEGTDSRKQAKLVIMELANMISVPMALNAVVRLNVADAIWNAGANTPISAAQILPRILPAGDAENLQRLLRILTSYGVFHEHIDAGERKYSLTDVGKTLVTDEQGLSYGAYVLQHHQDALMRAWPLVHEAVVDPTKEPFERANGEGAYGYYLKKEEMNELMVKAMSGVSVPFIKAMLEGYDGFQGVERLVDVGGSGGDCLRMILQKHPTIKEGINFDLPEVVAKAPPTPYVTHVGGDMFKSIPQGDAIFMKWVLTTWTDEEIKQIMRNCHKALPEGGKLIACEPVLPEHSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFRLLAIDAGFPHFRAFNVDHFYTVLEFQK 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02356 352 SUPERFAMILY "Winged helix" DNA-binding domain 9 105 IPR036390 -
Viun5g02356 352 PIRSF O-mtase 1 352 IPR016461 GO:0008168
Viun5g02356 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 352 IPR016461 GO:0008168
Viun5g02356 352 Gene3D - 1 105 IPR036388 -
Viun5g02356 352 PANTHER O-METHYLTRANSFERASE 19 339 IPR016461 GO:0008168
Viun5g02356 352 Gene3D Vaccinia Virus protein VP39 106 352 IPR029063 -
Viun5g02356 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 350 IPR029063 -
Viun5g02356 352 FunFam Caffeic acid 3-O-methyltransferase 107 352 - -
Viun5g02356 352 Pfam O-methyltransferase domain 130 333 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02356 Viun-Chr5 32238912 32242446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02356 1 352 Monolignol Biosynthesis Gene Families AT3G53140 74.373 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02356 - - gmx:100784957 636.721