Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02320 ATGGATACAGGTTTGAGTCTTAAACTTGGTCTTGAATTTGATAACTTAGAAGATGCATGGAAGTTTTGGGTTAATTATGGTGGTAGTAAAGGTTTTGGAGTTAGAAAACACTACCCTAGCAAGAATAAAAAAGATGGGTATATTACTTCTTACATCTATGTTTGTTGCAAGGAAGGTATGCGAAAATCAGATAAAAGAGACTTTAAGACCAATAATCCTCAACCCGAGACAAAAACAAGATGTGCTGCAAGAATGAAAGTTAAAAGAGTTGGTGAAAGATATAGAGTAGTTGATTTTATTGATGATCATAACCACCCACTTCATCTACCAGAAACAGTTCATCTGTTACCTTGTCAACGAAAAATAACAGATTGTCAAGCATATGATCTTGAAATGGTAGAACAAGCAGGGATTCAACAAAAGGCATCATTTGATTTGATGAGTAAATATGTAGGAGGTAGAGAGAATTTGGGCTATACAAGAGAAGATGAAAAGAACTATCTGAACTCAAAGAGGCGGAGAGATATGGCATATGGTGAAGCTGGAATTTTGTTACAATATTTCAAACAACAACTAATAGATAATCCTTCATTTTTCCATGCCTGCCAAATGGATTTGGAAGAACAAATAACAAACATATTTTGGGCTGATGCAAGAATGTTATTTGATTATCATTGTTTTGGAGATGTCATTTCGTTGGATACAACATATTGTACAAATGGAGATCATAGGCCTCTTGCAATTTTCTCGGGATTTAATCATTATAGAGGAGGGGTGATATTTGGGGCAGCCTTATTGTATGATGAGACCATTGAGTCCTTCAAATGGTAA 831 0.3502 MDTGLSLKLGLEFDNLEDAWKFWVNYGGSKGFGVRKHYPSKNKKDGYITSYIYVCCKEGMRKSDKRDFKTNNPQPETKTRCAARMKVKRVGERYRVVDFIDDHNHPLHLPETVHLLPCQRKITDCQAYDLEMVEQAGIQQKASFDLMSKYVGGRENLGYTREDEKNYLNSKRRRDMAYGEAGILLQYFKQQLIDNPSFFHACQMDLEEQITNIFWADARMLFDYHCFGDVISLDTTYCTNGDHRPLAIFSGFNHYRGGVIFGAALLYDETIESFKW 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02320 276 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
Viun5g02320 276 PANTHER OS01G0519700 PROTEIN 7 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02320 Viun-Chr5 31524957 31525787 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun5g02320 FAR1 3.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02320 - - vun:114184605 586.26