Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02310 ATGGCCGAAGAGGACCAGCCCAAAGCCTCCATCGTCGGCCACCAACACCAGCACCATCACCACCACCCTCCGCCGCAGCCACTACCCGGTCCACCACCACAGTATGGCACCTTCCAAGGCGTCGCCAACTACCCTCCTCCGCCCGAGCCACATCCCGCTATTGGCTTTCCCCAACCTGTTCCACCGGCCGGCGCCGTCAACGCCGGTCCTCTTCCACCGTACTACCCGGGATACCAAGCAGTACCCGGTTATGCAGTTGCTGAAGGAAGACCTGTAAGAGAGCGGCGCCTTGGTTGCTGTGGCCTTGGTTGTGGCTGGTGTCTGTTTATACTAGGCTTCTTTCTTGCTGCTATTCCATGGTACGTTGGGGCAATAATTATGCTGTGTTCCAGAGTAGACCACCGAGAGAAACCTGGATATGTTGCTTGTGTAGTTGCTGCTGTTCTGGGTACAATTGCGATTATTCTTGGTGTGACAAAGGGAGCAGATGACTGGTAA 498 0.5602 MAEEDQPKASIVGHQHQHHHHHPPPQPLPGPPPQYGTFQGVANYPPPPEPHPAIGFPQPVPPAGAVNAGPLPPYYPGYQAVPGYAVAEGRPVRERRLGCCGLGCGWCLFILGFFLAAIPWYVGAIIMLCSRVDHREKPGYVACVVAAVLGTIAIILGVTKGADDW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02310 165 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 165 IPR044804 -
Viun5g02310 165 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02310 Viun-Chr5 31006224 31009458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02310 3 165 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 34.862 5.91e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02310 - - gmx:100810998 216.083