Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02196 ATGCCAAGTGTGGCCGTCAAGCTCTATAGCGTGTTCTTCAAGTTCCTCTTGAAGCACCGTTTGCAGAACCGGATCCAAACCTCTTCCCAACACTCCGACTCGTTCGGTGTTACCACCCGACCCGAAGAAGTTGTAGCCGCCGCTAATCCCTCCTTCGCCGACGGCGTCGCCACCAAAGACATCCACATGGACCCCTTAACCTCTCTCTCCATCCGAATCTTCCTCCCCGAATCGGCCCTCAACGCTCCCGAGTCTCGTTCCAAACCTAGGACTCGCTCTATTCCCGAGCCTCAAACTCGATCCGCGCACCTCGATTCAATTACACGGAGGAAGAGCTACGGTCCGCCGCTCCTGGAGGAGCGCCGTAGCAACAGCTTTGGAGGGGGCTCCGGCGTCGAGTGTTTGAACCTGATGACGGAAGGCCCGTACCTGGGCTACTCGCCGCCGTCGGTGGCGCAGGGGGAGCGGCGGAGGCTGCCTGTGGTCCTGCAGTTCCACGGCGGGGGGTGGGTTAGCGGAGGTAGCGATTCGGTGGCGAACGATGTTTTCTGCCGGCGGATTGCGGAGTTATGTGATGTGATAGTGATTGCAGTGGGGTACCGGCTGGCACCGGAAAACCGGTACCCGGCGGCGTTCGAGGACGGCGTGAAGGTGCTGAATTGGCTGGCGAAGCAGGCGAATTTGGCCGAATGTAGCAGGTCGATGAGCGGTGGGAAGAGTGGAGGGCATGGTGGTGGGGAGTTCAAGAAATCGGATGCTCATAAGCATATTGTTGATTCCTTTGGGGCTACTGTGGTTGAGCCTTGGCTGGCTGCTCACGCTGATCCTTCAAGATGTGTTCTTCTTGGAGCAAGTTGTGGTGCCAATATTGCAGACTACGTAGCTCGTAAAGCTGTGGAAGGAGGCAAACTTCTGGACCCTGTCATGGTGGTAGCACAGGTTCTAATGTATCCATTTTTCATAGGAAGTGTTCCCACACGGTCTGAAATAAAGTTGGCGAACTCTTACTTTTATGACAAGGCCATGTGTACGCTTGCATGGAAACTTTTCCTACCCGAGGGGGAATTTAGTTTGGATCATCCATCTGCTAATCCCCTTGTCCCGGGCCGAGGTCCTCCTTTAAAGTTGATGCCTCCGACATTGACAGTTGTGGCCGAACATGACTGGATGAGGGATCGTGCCATTGCATACTCAGAGGAGCTCCGGAAGGTGAACGTGGATGCACCTGTTCTTGAGTATAAGGATGCGGTACATGAATTTGCAACACTTGATGTCCTTCTCAAAAGTCCTCAGGCCCAGGTTTGTGCTGAAGACATAGCCATATGGATGAAGAAATATATTTCTCTTCGGGGTCATGAATTCTCATATTGA 1371 0.5405 MPSVAVKLYSVFFKFLLKHRLQNRIQTSSQHSDSFGVTTRPEEVVAAANPSFADGVATKDIHMDPLTSLSIRIFLPESALNAPESRSKPRTRSIPEPQTRSAHLDSITRRKSYGPPLLEERRSNSFGGGSGVECLNLMTEGPYLGYSPPSVAQGERRRLPVVLQFHGGGWVSGGSDSVANDVFCRRIAELCDVIVIAVGYRLAPENRYPAAFEDGVKVLNWLAKQANLAECSRSMSGGKSGGHGGGEFKKSDAHKHIVDSFGATVVEPWLAAHADPSRCVLLGASCGANIADYVARKAVEGGKLLDPVMVVAQVLMYPFFIGSVPTRSEIKLANSYFYDKAMCTLAWKLFLPEGEFSLDHPSANPLVPGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWMKKYISLRGHEFSY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02196 456 PANTHER ARYLACETAMIDE DEACETYLASE 53 422 - -
Viun5g02196 456 SUPERFAMILY alpha/beta-Hydrolases 153 447 IPR029058 -
Viun5g02196 456 MobiDBLite consensus disorder prediction 84 102 - -
Viun5g02196 456 Gene3D alpha/beta hydrolase 11 451 IPR029058 -
Viun5g02196 456 MobiDBLite consensus disorder prediction 81 125 - -
Viun5g02196 456 Pfam alpha/beta hydrolase fold 162 421 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02196 Viun-Chr5 28060190 28063876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02196 1 456 Carbohydrate Esterase AT3G27320 72.707 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02196 - - gmx:100775445 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02196 5 28060190 28063876 Viun5g02196 5 28060190 28063876 ECH