Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02194 ATGGTCGTGGGTTCCTGCACACTAACATCTAACACGAAGAGAAGGGCCACCTACAAATTTTCCACCGACATGGACACTGAAGCTGCCACCAAGATCAAGCTTGATGCATTGAAAGAAAGAGCTGGGCGAGAGATCCGTGTTTTTGAAACATATGTTTCTTCATCATCAAATGCTGCATTATCCAATGAAGAGGTGACTGATGACTTCTATGAGTTTACTGCTGAAGATTATCACAGACTTTTGGCAGCTAAAAAGGAAGACAAGTTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCACGTAGGTCAGAAATGACCAAGGCTATAATTAGAGTTCGATTCCCGGATAATCACACATTGGAGACCACATTCCACCCATCGGAAACAGTCCAGAGTTTAATTGATGTCCTGACTAAAGTTATTGCACTGCCAGAGCAGCCATTCTATATATATACAACTCCGCCTAAAAAGATTATGAAAGACATGTCTCAGAATTTTTATGATGCTGGCTTTTGTCCTGGTGCCATTGTCTACTTCTCATACGATGTCCCTAAAGGTAGCACTGGTCCTTACCTTGAAGAAGATATCTTGTCTTTGAAGGAACTGCATGCTGCTAATGATGAAGGCCAACAATTTGAGCCTTTAGTACAGTCAAAACCTGAACCTGCTGTGCCAACACATCCTCCTCCTGTTGAACAACGCAAACCTGCCGAGAAAAAACTTGTTAAACCAAAGTGGTTAAAAATGTGA 756 0.422 MVVGSCTLTSNTKRRATYKFSTDMDTEAATKIKLDALKERAGREIRVFETYVSSSSNAALSNEEVTDDFYEFTAEDYHRLLAAKKEDKFLKTRKIREAEEAARRSEMTKAIIRVRFPDNHTLETTFHPSETVQSLIDVLTKVIALPEQPFYIYTTPPKKIMKDMSQNFYDAGFCPGAIVYFSYDVPKGSTGPYLEEDILSLKELHAANDEGQQFEPLVQSKPEPAVPTHPPPVEQRKPAEKKLVKPKWLKM 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02194 251 SUPERFAMILY Ubiquitin-like 83 181 IPR029071 -
Viun5g02194 251 ProSiteProfiles UBX domain profile. 105 181 IPR001012 GO:0005515
Viun5g02194 251 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 5 251 IPR044232 GO:0032984|GO:0051117
Viun5g02194 251 Pfam UBX domain 108 177 IPR001012 GO:0005515
Viun5g02194 251 MobiDBLite consensus disorder prediction 210 251 - -
Viun5g02194 251 CDD UBX2_UBXN9 110 183 - -
Viun5g02194 251 Gene3D - 99 181 - -
Viun5g02194 251 MobiDBLite consensus disorder prediction 234 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02194 Viun-Chr5 28019906 28026538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02194 43 138 C2H2 Transcription Factor Family AT2G01650 36.000 6.62e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02194 K15627 - gmx:100818386 350.517