Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02193 ATGGTCGTGGGTTCCTGCACACTAACATCTAACACGAAGAGAAGGGCCACCTACAAATTTTCCACCGACATGGACACTGAAGCTGCCACCAAGATCAAGCTTGATGCATTGAAAGAAAGAGCTGGGCGAGAGATCCGTGTTTTTGAAACATATGTTTCTTCATCATCAAATGCTGCATTATCCAATGAGGTGACTGATGACTTCTATGAGTTTACTGCTGAAGATTATCACAGACTTTTGGCAGCTAAAAAGGAAGACAAGTTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCACGTAGGTCAGAAATGACCAAGGCTATAATTAGAGTTCGATTCCCGGATAATCACACATTGGAGACCACATTCCACCCATCGGAAACAGTCCAGAGTTTAATTGATGTCCTGACTAAAGTTATTGCACTGCCAGAGCAGCCATTCTATATATATACAACTCCGCCTAAAAAGATTATGAAAGACATGTCTCAGAATTTTTATGATGCTGGCTTTTGTCCTGGTGCCATTGTCTACTTCTCATACGATGTCCCTAAAGGTAGCACTGGTCCTTACCTTGAAGAAGATATCTTGTCTTTGAAGGAACTGCATGCTGCTAATGATGAAGGCCAACAATTTGAGCCTTTAGTACAGTCAAAACCTGAACCTGCTGTGCCAACACATCCTCCTCCTGTTGAACAACGCAAACCTGCCGAGAAAAAACTTGTTAAACCAAAGTGGTTAAAAATGTGA 753 0.4223 MVVGSCTLTSNTKRRATYKFSTDMDTEAATKIKLDALKERAGREIRVFETYVSSSSNAALSNEVTDDFYEFTAEDYHRLLAAKKEDKFLKTRKIREAEEAARRSEMTKAIIRVRFPDNHTLETTFHPSETVQSLIDVLTKVIALPEQPFYIYTTPPKKIMKDMSQNFYDAGFCPGAIVYFSYDVPKGSTGPYLEEDILSLKELHAANDEGQQFEPLVQSKPEPAVPTHPPPVEQRKPAEKKLVKPKWLKM 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02193 250 Gene3D - 98 180 - -
Viun5g02193 250 SUPERFAMILY Ubiquitin-like 82 180 IPR029071 -
Viun5g02193 250 CDD UBX2_UBXN9 109 182 - -
Viun5g02193 250 Pfam UBX domain 107 176 IPR001012 GO:0005515
Viun5g02193 250 MobiDBLite consensus disorder prediction 233 250 - -
Viun5g02193 250 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 5 250 IPR044232 GO:0032984|GO:0051117
Viun5g02193 250 ProSiteProfiles UBX domain profile. 104 180 IPR001012 GO:0005515
Viun5g02193 250 MobiDBLite consensus disorder prediction 209 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02193 Viun-Chr5 28019906 28026538 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02193 43 137 C2H2 Transcription Factor Family AT2G01650 35.354 1.32e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02193 K15627 - gmx:100818386 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02193 5 28019906 28026538 Viun5g02193 5 28019906 28026538 ECH